| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1717 |
|---|
| Symbol | |
|---|
| ID | 5757013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1881675 |
|---|
| End bp | 1882145 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641302910 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001568733 |
|---|
| Protein GI | 160903152 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.659627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTTA CTGTTAAAAG CAGTTATGCT TTAAGAGCTT TGTTTGAATT AGCTGTATTA
GCCGAAGATG AAGGAAAAGA GAAAGTACCT ATCAGCGAAT TATCAGAAAG GCAAAACATA
CCAAAAGATT TTCTTGAAAA GATATTTATA GAATTACGTG ATGCGGGAAT AGTTAAATCT
GTTAGAGGTA AATTTGGAGG ATATGCTTTG GCAAAAAATC CAAAAGATTT ACGTTTGAGT
GAAATTATTC AAGTCTTAGA TAAACCACTT CAATCTTTTG ATTGTATTGT TGGCGAATGT
TCGTTGGAAA TAGAGTGTGC CGTTGAATTT GTATGGAAAA GGGTTAATAA TTCTATTATG
TTAGAGCTGA GTAAAATGAC TTTGCAAGAT ATAATCGATT ACGGAAGAAA AATTGCCAAG
ATCAAGATCG CTGAAAATGA AGGAGGTAGA TTAAAAAAAT TAAATGTCTA A
|
|---|
| Protein sequence | MSLTVKSSYA LRALFELAVL AEDEGKEKVP ISELSERQNI PKDFLEKIFI ELRDAGIVKS
VRGKFGGYAL AKNPKDLRLS EIIQVLDKPL QSFDCIVGEC SLEIECAVEF VWKRVNNSIM
LELSKMTLQD IIDYGRKIAK IKIAENEGGR LKKLNV
|
|---|
| |