Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1713 |
Symbol | |
ID | 5758551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 1876890 |
End bp | 1878170 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641302906 |
Product | alpha amylase catalytic region |
Protein accession | YP_001568729 |
Protein GI | 160903148 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0746329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAATAG ATTCACCAAG TTGGTTAAAA AGTTCTATAA TTTATGAAGT TTTTGTTAGA AATTATGGAA ATGCTGGAAC CTTCAACGAT ATATATAACG ATATTGAACG TATTAAGGCT TTGGGAGCAG ATATACTTTG GTTTATGCCT TTTTATCCCA TCGGAAAAGT TGGTAGAAAA GGTACACATG GGAGTCCCTA TTCAATAAAA GATTACGAAG AAATATCGAA AGAAATTGGT AATAAGAGGG ATTTTAAAAG ATTAATAGAC AAAGCACATG ATAACGGATT AAAAATAATG ATCGATATTG TTTTCAATCA CACCGCTATT GATTCGAAGC TAGCTGAAAC ACATCCTGAA TGGTTTATGA AAGATCAAAA CGGAAAATTA ACTAGAAAGG TAGAAGATTG GAACGACGTT TACGATTTGG ATTATGATAA TTTAGATTTA TGGGATTATC TAATAAATGT TTTAGATGGT TGGATTGATC TTGGTGTAGA TGCTTTTAGA TGTGATGTCG CTTCGCTAGT GCCTTTAGAG TTTTGGAAAA AATCTAGAGA ACTGTTGAAT CAAAAAAAGG AAATTATCTG GTTGGCTGAA ACACTTGACC CGAAATTTAT TCATGATCTC AGAACTAAAG GGTACGATGT TCACTCGGAC TCTGAGGTAT ATCAAGCTTT TGACCTTACA TACGATTACG ATGGCTTCTA TTATCTAAGG AGCTATTTTT CTGGAGAGAA AGATTTGAAG CATTTTTTTG AACATGTTTT TTTGCAGGAA ACTATATTCC CAAAAAATTC TCTTAAGTTG CGTTTTTTAG AAAATCATGA TAATCCTAGA ATAGCATCCG TTTTAGAGGG AAAAAATAAG ATTAAAAATT GGACTGTTTT ATATAATCTT TTGCCAGGGG CATCTTTAAT ATATGCAGGC CAAGAATTAA TGATGGAAAA ACTGCCTAAC CTTTTTGAGA AAGATTCAAT CAAATGGGAC AAAGGTGATT ATGAATTTTT AAGTTTTTTC AAAAAAATCA TTAAATTGAC TAAAGAGATT AAATCTACTT GTAATCAATT CTCTCTTTGC GAGTTATCTG AGGGTATAGT AATGATAAAA TGGAATGGAG AAGAGGAGGA ATACATTACC ATTTTGAATT TGGAAGATAG ACACGGAAAA ATACCAGTAG ATTTTAATTT ATATGGAACA GACCTTATAA CGAATGAAAC TGTTTCAATA CAAAACTACT TTGTGATCAG CAAGTTACCT ATGATTATAA AAGTCAGGTA A
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Protein sequence | MAIDSPSWLK SSIIYEVFVR NYGNAGTFND IYNDIERIKA LGADILWFMP FYPIGKVGRK GTHGSPYSIK DYEEISKEIG NKRDFKRLID KAHDNGLKIM IDIVFNHTAI DSKLAETHPE WFMKDQNGKL TRKVEDWNDV YDLDYDNLDL WDYLINVLDG WIDLGVDAFR CDVASLVPLE FWKKSRELLN QKKEIIWLAE TLDPKFIHDL RTKGYDVHSD SEVYQAFDLT YDYDGFYYLR SYFSGEKDLK HFFEHVFLQE TIFPKNSLKL RFLENHDNPR IASVLEGKNK IKNWTVLYNL LPGASLIYAG QELMMEKLPN LFEKDSIKWD KGDYEFLSFF KKIIKLTKEI KSTCNQFSLC ELSEGIVMIK WNGEEEEYIT ILNLEDRHGK IPVDFNLYGT DLITNETVSI QNYFVISKLP MIIKVR
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