Gene Pmob_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1705 
Symbol 
ID5757818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1869077 
End bp1869580 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content31% 
IMG OID641302896 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_001568721 
Protein GI160903140 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA AAGGTTATTC TCATAAATTT GGTGATGATG TGAACACCGA CTACATTATT 
TCTGGAAAAT ACAAATTCAA TACCATCGAT ATGGATGAAT TATCTGTTCA TTTGATGGAG
GATCTAAGGC CAAATTTTTA TAATGAAATC AAAAAAGGTG ATTTCATTGT TGCAGGAGAA
AATTTTGGTT GTGGTTCTTC TAGGGAACAA GCTCCTTTAG TGATAAAACA TGCTGGTATA
AGTGCTGTTA TAGCAACATC TTTCGCCAGA ATATTTTATA GAAATTCCAT AAATATTGGC
TTACCTTTAG TTGAAGTTCC AACTGATAAT ATAGAAGAAG GTGATTTATT GACTGTTGAT
CTAGAAAAAG GTGTAGTTAA GAATCTTACC AAAGATGAAA TTTTGAAGAT TAAATCTCTC
CCCAAAGTGA TGCTAAAGAT TTTACAAAGT GGGGGTTTGG TTAATTATTA CAAAAAATAT
GGTACTTTAG AATTAATGGA ATAG
 
Protein sequence
MELKGYSHKF GDDVNTDYII SGKYKFNTID MDELSVHLME DLRPNFYNEI KKGDFIVAGE 
NFGCGSSREQ APLVIKHAGI SAVIATSFAR IFYRNSINIG LPLVEVPTDN IEEGDLLTVD
LEKGVVKNLT KDEILKIKSL PKVMLKILQS GGLVNYYKKY GTLELME