| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1680 |
|---|
| Symbol | |
|---|
| ID | 5757364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1837762 |
|---|
| End bp | 1838862 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641302872 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_001568697 |
|---|
| Protein GI | 160903116 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0132678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TGCTAGTTCT TAGTTTAATC AGTTTAATGT TTGTAAGTTC TTTCGCTTTA
AAAGTTATTA TGGTAACTGA TGTGGGTGGT TTGGGAGACA AGTCTTTCAA CGACGGAACA
TGGGCTGGAG TTCAAATGGC TATGGATCAA CTTCCAAATG TTGAGGGAGA AATAATCATT
TCCAAGGAAC AAACTGATTA TATTCCAAAT CTAACCAACG CAGCTCAAAG AGGAGATGTA
GTAATTGGAG TTGGATTTAT GATGGCAGAT GCCTTATTCA ATATCTCCGC TCAATATCCC
GATACATTTT TCATAGGAAT AGATATAGAA CCATCTCCAG GTCAAACGGT CCCAAACAAT
TTAGCCCTTT ACACCTTCAA AGAACATGAG GCAGGCTTCT TAGGTGGATA CGTAGCGGCT
GCCATGACCA AAACAGGTAA GATAGGTTTC GTTGGTGGAA TAGAAATACC CCCGGTCAAA
AGATATGAAA TAGGTTACAG AGCAGGAGTT GAAGCCTACA ATCAAATCCA TGGTTCCAAT
GTCCAAGTTT TAATCGGGTA CGCTGCCAGT TTTGAAGACC CGGCAAAGGG CAAACAGTTA
ACCCTTTCTC AATACGACAA CGGCGCAGAT ATCGTCTTCG CAGCCGCTGG TGCAACAGGT
AATGGTGTCA TCGACGCTGC AAAAGAAAAA GGAATGTCTT TCTACGGTTT ACCAGCAAAT
GCGCCTCTAC AACAGGTTAT AGATAAATAT TATGAAAAAG GTGAGGGTTA CTTCGCAATA
GGAGTCGATG TTGATCAAGA TTATATGGCA CCTGGTTATG TTTTACTTAG TATCACAAAA
AAGATCGATG TAGCAACTTT TGATGGTATC AACTCAGCTT TGTCAGCAAG ATATTTTCAA
TCTGGACATA ACAACTTAGG TATAGTCGAT GACGGTGTTG GAATATCTCC AATGAAATAT
ACCAAGGGAC TTATACCAAA CGAAGTAATA GCAGAATTGG CATATTTACA ATCACTTGCC
AAGGAAGGAA AAATCAATAT CCCTCAAAGC GAAGCTGAAT TAGGTTCCTT TAATGCAAGT
AATATAGTTT TTCCATTCTA A
|
|---|
| Protein sequence | MKKLLVLSLI SLMFVSSFAL KVIMVTDVGG LGDKSFNDGT WAGVQMAMDQ LPNVEGEIII
SKEQTDYIPN LTNAAQRGDV VIGVGFMMAD ALFNISAQYP DTFFIGIDIE PSPGQTVPNN
LALYTFKEHE AGFLGGYVAA AMTKTGKIGF VGGIEIPPVK RYEIGYRAGV EAYNQIHGSN
VQVLIGYAAS FEDPAKGKQL TLSQYDNGAD IVFAAAGATG NGVIDAAKEK GMSFYGLPAN
APLQQVIDKY YEKGEGYFAI GVDVDQDYMA PGYVLLSITK KIDVATFDGI NSALSARYFQ
SGHNNLGIVD DGVGISPMKY TKGLIPNEVI AELAYLQSLA KEGKINIPQS EAELGSFNAS
NIVFPF
|
|---|
| |