Gene Pmob_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1678 
Symbol 
ID5757362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1834950 
End bp1836047 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content39% 
IMG OID641302870 
Productinner-membrane translocator 
Protein accessionYP_001568695 
Protein GI160903114 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.662274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTCTT CCTCAAAACT TATGAAATCA AGATGGATGT CTTTTCTAGT TCCTTTTTTA 
GCGGTTGTAG TTTCACTTTT AATTGCAGCA ATTATAATTT TAGCCATAGG CCAAAACCCC
TTAAAAGCCT ATGGAGCTAT GATTAAAGGC GCAGTTGGTA GCAGGCTTTC CTGGGCGGAC
AATATAACAA AAATGACAAG TTTGTTACTA ACTGGTTTGG CTGTAGGATT TGGATTCAGA
GCAGGAGTTT TCAATATAGG TGCGGAAGGT CAAATGGCTA TGGGTGGGAT AATGGCGGTA
GCGGTAGGAC TGAGCTTAGG TAATGTCCCT TCTGCTATAG CAATACCTTT GACTATTCTG
GCAGGGATGG CTGGAGGAGC CTTTTGGGCC TCTATAGCAG GGTGGCTTAA AGCTCAAACA
GGTGCCCACG AAGTTATAAC TACCATTATG TTGAACTGGA TAGCTTATCA TATTACCAAT
TATCTGGTAG CCGGACCATT TGCTGTAGGT GCAGGCGTTC CAAAATCCCC TGAAATTGCA
GAAAGTGCTC AACTTCCTCC ACTGTTAACA GTCCAAGCAT CTACCATTCC TTCTAGTATT
TTAATAGCCA TCGTTGCGGC AATTGTTATT TATATAATAT TAGAAAGAAC AACAACTGGA
TATGAAGTTA AAGCTGTGGG ATTCAATCCA TATGCAGCAG AGTATGGAGG AATATCAATA
AGTAAAAATA TTGTACTTAC AATGGCTATT TCAGGAGCGT TAGCTGGTTT AGCTGGTGCT
TTAGAAGTTA TGTCCGTTCA TCATAGAATT TTTGGTGCAT TTACAAGCGA TAGAGGTTTT
GATGGAATAA CTATTGCATT GATCGGTCAA AACAATCCTA TAGGTATTAT TTTTGCAGCT
TTTCTTATCT CCTCACTAAG ATCTGGTTCA AATGCTATGC AAACTATAGG TGTACCAGAT
GATATTATTG TTGTTATACA AGGAATAATA ATATACTTTG TCGCAGCGGA TAGAATAATA
CGAACTTGGA TCATAAAGGC TTCTCAGCTC GGAAAGAAAA AATCCCCTAA TACACTTCAA
GGTGGTGAAG ATGAATGA
 
Protein sequence
MTSSSKLMKS RWMSFLVPFL AVVVSLLIAA IIILAIGQNP LKAYGAMIKG AVGSRLSWAD 
NITKMTSLLL TGLAVGFGFR AGVFNIGAEG QMAMGGIMAV AVGLSLGNVP SAIAIPLTIL
AGMAGGAFWA SIAGWLKAQT GAHEVITTIM LNWIAYHITN YLVAGPFAVG AGVPKSPEIA
ESAQLPPLLT VQASTIPSSI LIAIVAAIVI YIILERTTTG YEVKAVGFNP YAAEYGGISI
SKNIVLTMAI SGALAGLAGA LEVMSVHHRI FGAFTSDRGF DGITIALIGQ NNPIGIIFAA
FLISSLRSGS NAMQTIGVPD DIIVVIQGII IYFVAADRII RTWIIKASQL GKKKSPNTLQ
GGEDE