Gene Pmob_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1628 
Symbol 
ID5757018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1783505 
End bp1786294 
Gene Length2790 bp 
Protein Length929 aa 
Translation table11 
GC content30% 
IMG OID641302817 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001568645 
Protein GI160903064 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CAAAATATCG GAGTGTGGAG CATATGGTAA GCAAAATTTT AAATATTATA 
TACAATGATA AACCTCAAAA TGTATTAAAA TCAACTTTTA AAGAAGTATC TTCCCAATTG
AAAGAATCAA TGGAGAAAGA CAACATTATG TTTATTTATC AATCAAGCAG AGAGGTTTTT
AAAGCTTTAG CTTCTACAAT AGATAAGTTT GAAAATATTA AAATATACCT ACGCGGAGAC
GAAGATCTAA AAAACAAAAT TTTTTCAAAT GAGATCGTAC CTGTGAATCT AAAAGATGAT
ATTTCACAAG TAAGTTCTAC TGCAAACGAT ATAAGAGAGT TATTTTTGTA TCCGATATTT
TCCGAAGAAG GCTTAATTGG CGCCGTCGGA TTATTTGACA ATCAAATTGA TAAAAATACT
TTCGACCAAC ATTTTTTTTA TTATTCCGTA TTGATTAATT TGATTATAGA AAAATTGAGA
ATTAGGGATT TGCAAGACAA GGTAATTTTA ATGGAAAAGC TCACCGACAT TATAGAAGAA
ATTACCGAAA AAGATATAAT AGTCAATAAT GTATTAAAAC TCCTAAAAGA TTCTCTACAT
GCAGAAAGCA TAGCATTCTG GAAACTTCAA GGTGATACTC TCGAAATCAA ATACTTTTTA
GGAATAGATG AAAGCACAAT CATAACTAGA ACTATCCCTA TAGAAAATAC CCTCGAAGGT
AAAGCAATAA AAGAAAGATC GAGTTATATG CTAGTGGGAC GAGAAAACTT TCAAAATTAT
TTTATTCCTT TTAATATAGA TCTCAAATCT TCTATTTATT CTGTTATAGA ACAAAATGAT
GAAGTTTATG GCGTTTTAAG TGTTTATAAC AGAGAAGAAG AATACTCATT TAGAACTTAC
AAAAATTTTG ATGATGCAGA TTTCCACGTT TTTTCGGACA CCGCCAAAAG ATTAGCTTTT
TCTATTCATA GAATAAATTT ATACAACAAA CTTCAAAATG AAGTCAGTAA ATTGACTGAA
TTGAAAATGA ATTATGAACA GCTTATTGAA AAACAAAAAG AACACTTAGA TATGCTAAAT
GCATTGGATA AGATATCCCA AGCTGTGAGA TCTGTTTACG ATAAAAATTT GGCAATAAAA
ATAATGCTTT TAGGCTTAAC TTCTGGGAGA GGTCTCAAGT TCAACAGAGC TCTTTATTTA
GAAAAGGACA AGGTTCGGGG ATTCCTTGTT CCAAAAATAT GGGTTGGTCC TGATACAGAA
GAAGACGCTA CCGAAATCTG GAAAGACGCA AACATTAGGG CTTTAAAATA CGGAAACGTC
GTTCAGTACC TAAAAGAGGA GGCCATAAAA ATACCCACCA ATAATAAACT AATCCTCAGT
TTACAAAATA AAGTTTTAGC ATATAAAGGG CATCCTATTT TAGAACGAGT CGTTGAAAAA
AAACAGGTTT TACATATCGT TCCTCAAATG TTGGAAATTA AATGGGAAGA TTTAGAGGAT
ATATACGATA TAGTTAAAAT TAATGAGTTT CTTATTTTCC CAGTCGCAGG AATGACTGAA
ACTAAAGGAG TAGTAATAGT TGATAACAAA ATAAATAAAA AACCCATCAC CAACATTGAA
ACTGAAATTG TAAAATTATT TAAAGATAAT ATGGGATTAG CTTTAGAAAT GATAGAAAAT
TATCAAGAAT TAAAAGAAAA AACATTGCGA TTAGAAGAGC AAAAAGATTT GATGGATTAC
TATAGAAGAT TCAAAGACAA TATATTACAA AACCTGGCTG TTGCGGTGGT TGTTGTTGAT
AGAAATGGAA AGATAAACGA ATGGAACAGA AAGGCAGAAA ATTTTTTCTC CAGGCCAAGA
GAGACCATGA TCGGAACAGC TATCCAAGAT ATAACAGATA CAATAGGGGA AGAAATAATT
GAAAAAATTA AAGTTATTTA TGAAACCAAA AATAATATCA AATTAAAGAA TTATGAAGTA
AAACTTTCCG ATACCAAGAA AATTTTTGAT ATTCAGCTAT CCCCTTTGAG AAACGAAGAA
TTAGGAGTGA TAGAAGGCGT TATAATTGTT TTTGATGATG TAACCGAGCT ATACAACCTT
CAAAAAGAAA TGGAAAAGCG TGAAAGACTT GCTGCCATGG GAGAAATGAC TGCTAGAATA
GCTCATGAAG TGAGAAATCC TATTACTATT ATCGGCGGCT TTTTAAACAG GATAGCTAAA
ATGAACGAAA TGGATGATAT TCAAAAATAC ACCCAAATTA TTAAAGAAGA GCTTTCAAGG
CTCGAACATA TAGTAAATGA GATACTAGAA TATTCTAGAG GAGGTAAAAT TAACCAGATT
GAAGAAGTCA ATTTAATAGA AATCATACGC GGAATAATAT TGATGTACGA AGATTTTATA
CAACAAAAAC ACGTTATGGT GAACACTGAT TGGTTAAAAG AAGAGATCTT AATAAAAGTA
GATAAAGATA AAATAAAACA GGTATTGATG AATTTAATAA AAAACGCTTT AGAGAGTGTC
AATAACAATG GAAAAATTGA TATAAAAGTG GGGTTTACTG CTGAAAATAA AGTTTTTTTT
GAAATAACCA ACGATGGACC CTCTATTCCC CAGGAAATTA AAGAAAAATT ATTCACCCCT
TTTCTTACTA CAAAAAGTAA CGGTACAGGA TTGGGTTTAG CTATTTGTAA AAAAATAATC
GAAGAAGAAC ACAAAGGTAA AATTTATTTG GTAAAATCTG ACGATACTGG AACTTCTTTC
AGATTTGAAA TTCCAACAGG TGAGAAATAA
 
Protein sequence
MKKTKYRSVE HMVSKILNII YNDKPQNVLK STFKEVSSQL KESMEKDNIM FIYQSSREVF 
KALASTIDKF ENIKIYLRGD EDLKNKIFSN EIVPVNLKDD ISQVSSTAND IRELFLYPIF
SEEGLIGAVG LFDNQIDKNT FDQHFFYYSV LINLIIEKLR IRDLQDKVIL MEKLTDIIEE
ITEKDIIVNN VLKLLKDSLH AESIAFWKLQ GDTLEIKYFL GIDESTIITR TIPIENTLEG
KAIKERSSYM LVGRENFQNY FIPFNIDLKS SIYSVIEQND EVYGVLSVYN REEEYSFRTY
KNFDDADFHV FSDTAKRLAF SIHRINLYNK LQNEVSKLTE LKMNYEQLIE KQKEHLDMLN
ALDKISQAVR SVYDKNLAIK IMLLGLTSGR GLKFNRALYL EKDKVRGFLV PKIWVGPDTE
EDATEIWKDA NIRALKYGNV VQYLKEEAIK IPTNNKLILS LQNKVLAYKG HPILERVVEK
KQVLHIVPQM LEIKWEDLED IYDIVKINEF LIFPVAGMTE TKGVVIVDNK INKKPITNIE
TEIVKLFKDN MGLALEMIEN YQELKEKTLR LEEQKDLMDY YRRFKDNILQ NLAVAVVVVD
RNGKINEWNR KAENFFSRPR ETMIGTAIQD ITDTIGEEII EKIKVIYETK NNIKLKNYEV
KLSDTKKIFD IQLSPLRNEE LGVIEGVIIV FDDVTELYNL QKEMEKRERL AAMGEMTARI
AHEVRNPITI IGGFLNRIAK MNEMDDIQKY TQIIKEELSR LEHIVNEILE YSRGGKINQI
EEVNLIEIIR GIILMYEDFI QQKHVMVNTD WLKEEILIKV DKDKIKQVLM NLIKNALESV
NNNGKIDIKV GFTAENKVFF EITNDGPSIP QEIKEKLFTP FLTTKSNGTG LGLAICKKII
EEEHKGKIYL VKSDDTGTSF RFEIPTGEK