| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1610 |
|---|
| Symbol | |
|---|
| ID | 5758459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1755877 |
|---|
| End bp | 1760340 |
|---|
| Gene Length | 4464 bp |
|---|
| Protein Length | 1487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641302799 |
|---|
| Product | CoA-substrate-specific enzyme activase |
|---|
| Protein accession | YP_001568627 |
|---|
| Protein GI | 160903046 |
|---|
| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
[COG3580] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTACG TTGGGTTTGA TATTGGTTCA TCAAGCATTC ATGTAGCGGT CATTGACGAA
GAAGGAAAAC TAAAATACGT TAAAGAAAGT ATTCCACATT TTGGTGTGCC TTTAAAAAGG
CTACCGGAGA TTTGGGAATC GATAAAACCT GAACTGGATG GGGAAGTACT TTCTACGTCT
TTCACGGGAA TAGGTGCACA ACTTTTCAAC AAAGTTTTTT CGGAACTCTT GTTTGATTAT
GAAAGTGTTA CCATACCCAA AGGTGCTTCT TTTCTCGAAC CAAATGTTTC CTATGTATTC
CACATTGGAG CAAAGGACTC ATATTTTTTA AGACTTGGAC ATCTTAAAGA AAAGGTGAAT
CTTTTAGAGT TGTCAGCTAA TAGCAAATGT GGCGGGGGTT CAGGAATCTT AGTTGAAAAA
CAGTTGAAAA GATTATACTT AAAAAACGAT TCAGAGTTTT TTCAGATAGA TGATTACTCA
CAAAAAATTG AACTAATGAG AAAATTGTAT GCCCAAGCAG AAAACGAGGT GAAAGATTAC
AGCGATATTC AGGGCTTCAA TGCTAGATGT GGTGTTGTAA TTCAATCAGA TTTGATACAC
GAACAAAATG AAGGTGCTCA AAGGCCCTTT TTAGTTGCAA AATTGTACTC TACAGTAGCT
AGGAATTTTA AAAATGACGT GATTGGAGCG AGGGAACTTG ATCCATCTCT CTCAGCCATA
GCTACAGGAG GAGTCTTTTC AAGTGATTAT ATCCTCAAAA GTTTCAATAT GTTAACTAAT
TTAAATGTAA AAAGGCCTAA GTACCATACC GCTGTTGCAG CTATTGGGAT AGCTCTGGAA
GCGTTAGAAA AGAAAAACAA ATTTGTGATA GATTTTAACC GACTTTCTGA GATCTCTAAT
TTTACGAAGA GTAAACGTCC CTATGCTAAG CCTCTTTATG CCTTTCTTGA TAAAGTCCAC
AGCTACGAAG GAAAAATTGA GAAAGTGCAA CCTGATGTGG TTAGAGATGT AACCATAGGA
GTAGATGGAG GCTCAACCAC CACAAAAGCT GCGATTGTGG ACGTTGAAAC GGGTGCCCTT
TTAGACAAAA TTTACATCAG CACCCATGGT GATCCAGAAA GAGCTCTTAA AGAAGTGTTT
AGACACTTAG CCAAAAAATC CAATAATTAT AATGTTCTTG GTGTATGTAC CACAGGATCA
GCCAGAAAAT TGTACGAGAG AATTTTAGTA AGTCAAAAGA AAAAAGAAAC TTTAGAAGAA
GAAGGATACG CAGTTTTAGA TGGAGCCGTT GATGAAGTCA CATGTCACGC CAAGGGAATT
AAATTTCACG ATGAAGAGAT CGATACGATA TTTGAAATCG GTGGACAAGA TATGAAGTTC
ACTTCTTTCA AACTTAATGG AGAAGAAGCT ACAGATCAGA TAAAAGAGGC TAGGATGAAT
TACTCATGTC AAGCCGGAGC TGGTCAAACA TTGGAGAACA TGGCTCAACT GTTAGGCTTG
GATGTCAAAT CGACACTTCA AGAAGCCGCA TTGAAAGCAG AAAAAGTACC CATTATAGAT
TCTACCTGTG GTGTTTTCAT GGAGATGGAA GAAAACCGTT TAATTTCTGA GGGTTTTTCA
CAAGAAGAGA TAGCGGCAGC TATAGTAAGA TCCACAGCAG CTAGTTATTT TAATAAATTT
GTTGGAGGTC CACAACATGT TCAAAACAAA TGCTCTTGTC AAGGGGGACC AGCCTTGGGG
AAAGCATTTT TGGCTGCAAT GGCACAAGTT ACAAACAAAG ATATCTACGC TTATCCCCAC
AGAGAATTGT TTGGAGCATG GGGAGCGGGT CTTTTTCTAA GAGAAGAGAT ATTGAAGGTG
AAAAAAGAAG GAAAAGAAGT GCGCTCAGCT TTCAGAGGCT TTGAAGTAGT AGATATGAAA
TTTGAAAAAG AAGAGGTAAT GTGTTCAGAT TACTTCGGCA AATCGTCCTG TAAGGTAAGA
AATTGCAAAT TGAAAATCTT TACTATAGCA GGCGAAAAAG TTATAACAGG TGGTTTTTGT
CCAAGAGGGA ACAGTGAAGG GGCAGAGAAG GTAAAAGTAG ATTATGTTGA AATTTTCCAT
AGATTGTTTG AAAAACATTT TGAAGGCATA AAATACGAAA AGTTGGACGA AATAAATGTC
GATAATGAAA AAACGGTAGG TATTCACAGA GCTGGAGTAA CCTTAGGAGA AATAGGTATT
TGGTCTGCCG CATTGTTTAG TAAAATTGGA TTTTTACCAG TATTATCTCC AGTATCAGAT
GAAGAAATTG CACAAAGAGG TATTAATATT GCTCCTACAG AGTTTTGTAT AGCGATGAAA
CTCGTTATAG GTCACGGGGA TCTGCTGGCA AAAGATAAAA GGATAAAACA CCTGTTTAAC
CCTTCGGTTA TTGAAGAAGT AAGAGATAAA AAACCAATGA GAAAATTTTG CATATATACC
GAGGCTGAAG GTTACTTGTT ACAAGACATA TTGGGATTGG AAGAAGATAG AGAGATTCTG
CCTGTTCTTT ACTGGAAAGA TAAAGAAAGG TCAGCTCAAG CGATATACGA TGAATTAAAA
AGAATTGGTT ACAATATTTC CAAAGAAGAG ATATTGGAAG CCATAGATTA TGCAGATCAA
AAGTTAGAAG CGTTCAAAAG CGATTTACAC AAACAAGGGG AAAGATTCTT AAACAAATTA
GAAAAAAGTG AAGAGATAGG GTATGTAGGA TTGGGAAGAG ATTATGTTGT ATTAGACCCT
CAGGCTTCCT CACAATCAGG TTCTATGTTC ACCAAGCAAA GAGGTATGAA TTATATTCCT
CAAACTTTTT TGGAAGAGTA CTACAAGGAT ATTCCTATAG ATGAACTTTC TTTCAACGAA
TACTGGTATC AAAATGCGCA TATTCTCCAA GCTTCTATAT TCGTTGCACA ACATCCAAAA
CTATTTCCGA TAAGACAGAT GAATTTTGCT TGCGGACCAG ATTCAGTCAA ATTTTATCAT
GAAGATGAGA TATTCAAAAG AGCAGACAAA CCGTTTTTGC ATTTAGTGAC AGATGCACAA
ACCAACAACG CTCCCTTTGT TACAAGAGCT GAGGCACACG ATCGAGTGGT GAAAAAGAGT
AAACCAAAAA CGGATTTGGA GTTCAAAGAT TTTGTCTTAT TCCCCGATGG TCATAAGGAC
AAATTAAAAT TGGGGCAGAG GCAGTGGCTC ATTCCCTACA TGGGTGAGGC AAGTAACCTA
GGAAAAGCTA TACTTAAACA TTACGGAATA GAAGCGAAGG TTTTACCAAC GGCCACAGTT
CAAGCCAAAG AAGCGGCAGA TAGGTTCATC ACAACGGAAG TTTGTTTTCC GTTAAGAGGC
GTGGTTGGTG ATGCGATGGC AACCTTGGAA GAAATAGCCA GAGATAAAGG AAAGGACTGG
ATAAATGACA ATACCGTTAT TTTCTTGCCG ACCACTTCTG GCCCATGTCG TTTTGGTAAG
TATGGAGAAG TTCTGAAGAT TTTTTTACAT AAAGAAGGAC TTGACAATAT CCCTATAATC
AGCCCTTCTG TTGATACGGG TTACCTCCAA ATAGAAGCGC CAGAACAGTT TAAAACTCTT
TATCAGAAAG CAGACGCATT AATAAATGTT TTCAGGGCAA TAAAAATGGC GGATATGACA
GATGATTTAA TCAGAAGATT CAGACCATAT GCGGATGATT TTTCTGATTT CGATGAAACT
ACCCAAAAAT TATGGGAAAA CCTACAACAA TTACTGATGG AAAAAGGCGG TTCTATAAAA
TATCTAAAAA GATGGGTGAA TGACGCTATA GATACTTTCA CAAAGTTATC CCCAAGTGCG
AAAGAGCATT CACTTCCTTT AGTATTGTAC ATAGGGGAAA TATATTCAAG ACAACATGAT
CCTTACACAG ATTATGTAAT GGAAAGGATA GAAGAGGAAA GGTTAGAAAT AATCAGAGGG
ACAATAGCTG AATGGTTAGA ATATGTGATT TACATTAACG AAAGGAGAAA CCCTAATTTT
CTTTTCCGAT TTGTGGATAA TTACATGGGT TTCACAGATT GGCGCTTCAA AAGAATTTTT
GGGGCGTATT CTAAAGACCA CGCTGTTTTA CCCAAACCTC AAAAAATCAT CGATGACATG
CAAAATAGTA GAAAGTACCA CGGTGATATT GTAGGAGAAT CACCTTTGGT AATTGGGATA
TTTCTAAAAT TTTTAAATGG TGAATTGGCA AACGGTAGAC AAAAAGTTTC TGGGATATTC
CATGTAGGAC CTTTCACTTG CATGCAAGAA GGCGTGGCGA TGGCAAAAAT GGATGCCATC
GCCAAAGAAG TATCAAAACG AGATCCTTCA TTGGTTGTTC CAATGATTCA TGCATTTTTT
GGAGATTCTG CCAATACGAA TCTCGAAGCT GAAATTGCAG CATTCAGAGA ACAGTGCTAT
CTCAAACAAA AATTGACAAA ATAA
|
|---|
| Protein sequence | MYYVGFDIGS SSIHVAVIDE EGKLKYVKES IPHFGVPLKR LPEIWESIKP ELDGEVLSTS
FTGIGAQLFN KVFSELLFDY ESVTIPKGAS FLEPNVSYVF HIGAKDSYFL RLGHLKEKVN
LLELSANSKC GGGSGILVEK QLKRLYLKND SEFFQIDDYS QKIELMRKLY AQAENEVKDY
SDIQGFNARC GVVIQSDLIH EQNEGAQRPF LVAKLYSTVA RNFKNDVIGA RELDPSLSAI
ATGGVFSSDY ILKSFNMLTN LNVKRPKYHT AVAAIGIALE ALEKKNKFVI DFNRLSEISN
FTKSKRPYAK PLYAFLDKVH SYEGKIEKVQ PDVVRDVTIG VDGGSTTTKA AIVDVETGAL
LDKIYISTHG DPERALKEVF RHLAKKSNNY NVLGVCTTGS ARKLYERILV SQKKKETLEE
EGYAVLDGAV DEVTCHAKGI KFHDEEIDTI FEIGGQDMKF TSFKLNGEEA TDQIKEARMN
YSCQAGAGQT LENMAQLLGL DVKSTLQEAA LKAEKVPIID STCGVFMEME ENRLISEGFS
QEEIAAAIVR STAASYFNKF VGGPQHVQNK CSCQGGPALG KAFLAAMAQV TNKDIYAYPH
RELFGAWGAG LFLREEILKV KKEGKEVRSA FRGFEVVDMK FEKEEVMCSD YFGKSSCKVR
NCKLKIFTIA GEKVITGGFC PRGNSEGAEK VKVDYVEIFH RLFEKHFEGI KYEKLDEINV
DNEKTVGIHR AGVTLGEIGI WSAALFSKIG FLPVLSPVSD EEIAQRGINI APTEFCIAMK
LVIGHGDLLA KDKRIKHLFN PSVIEEVRDK KPMRKFCIYT EAEGYLLQDI LGLEEDREIL
PVLYWKDKER SAQAIYDELK RIGYNISKEE ILEAIDYADQ KLEAFKSDLH KQGERFLNKL
EKSEEIGYVG LGRDYVVLDP QASSQSGSMF TKQRGMNYIP QTFLEEYYKD IPIDELSFNE
YWYQNAHILQ ASIFVAQHPK LFPIRQMNFA CGPDSVKFYH EDEIFKRADK PFLHLVTDAQ
TNNAPFVTRA EAHDRVVKKS KPKTDLEFKD FVLFPDGHKD KLKLGQRQWL IPYMGEASNL
GKAILKHYGI EAKVLPTATV QAKEAADRFI TTEVCFPLRG VVGDAMATLE EIARDKGKDW
INDNTVIFLP TTSGPCRFGK YGEVLKIFLH KEGLDNIPII SPSVDTGYLQ IEAPEQFKTL
YQKADALINV FRAIKMADMT DDLIRRFRPY ADDFSDFDET TQKLWENLQQ LLMEKGGSIK
YLKRWVNDAI DTFTKLSPSA KEHSLPLVLY IGEIYSRQHD PYTDYVMERI EEERLEIIRG
TIAEWLEYVI YINERRNPNF LFRFVDNYMG FTDWRFKRIF GAYSKDHAVL PKPQKIIDDM
QNSRKYHGDI VGESPLVIGI FLKFLNGELA NGRQKVSGIF HVGPFTCMQE GVAMAKMDAI
AKEVSKRDPS LVVPMIHAFF GDSANTNLEA EIAAFREQCY LKQKLTK
|
|---|
| |