| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1587 |
|---|
| Symbol | |
|---|
| ID | 5757902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1730297 |
|---|
| End bp | 1730791 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641302778 |
|---|
| Product | 3-isopropylmalate dehydratase, small subunit |
|---|
| Protein accession | YP_001568606 |
|---|
| Protein GI | 160903025 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR02084] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTCA GAGGGAGAGT TTTCAAATAC GGTGACAACG TTGATACCGA TGTTATTATA
CCAGCTAGAT ATCTAAACAA CCCTGAACCA GAGATATTGG CACAACATTG TATGGAAGAT
ATAGATAAAG ATTTCGTAAA AAAAGTTCAA AAAGGAGACA TTATAGTAGC CGGAAGGAAT
TTCGGTTCTG GAAGTTCTCG TGAACATGCT CCATTATCGA TTAAGGCGGC AGGTGTTTCT
TGTGTCATAG CAGAAAGTTT TGCAAGGATT TTTTATCGAA ACGCCATCAA TATTGGATTA
CCTATACTTA TTTCTAAAGA GGCTTCTCAT AATATCCAAG ATGGTTCGGA AATAGAGGTA
GACTTAGACA ATGGAATCAT CAAAGATCTA AAAAACAAGA AAGAATACTA TTCAGAGAAA
TATCCTAAAT TTCTTCAAGA AATAATATCT TCCGGGGGAT TGATAGAGAA GATCAAAAAG
GAGGTCGCTC AATAG
|
|---|
| Protein sequence | MKFRGRVFKY GDNVDTDVII PARYLNNPEP EILAQHCMED IDKDFVKKVQ KGDIIVAGRN
FGSGSSREHA PLSIKAAGVS CVIAESFARI FYRNAINIGL PILISKEASH NIQDGSEIEV
DLDNGIIKDL KNKKEYYSEK YPKFLQEIIS SGGLIEKIKK EVAQ
|
|---|
| |