Gene Pmob_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1586 
Symbol 
ID5757901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1729247 
End bp1730296 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content37% 
IMG OID641302777 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001568605 
Protein GI160903024 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCGA TAGCTGTTCT ACCAGGGGAT GGAATTGGGA AGGAAGTAAT CAACGAAGGT 
CTTAAAATAT TAAATTTTAT GGGAGAAAAG TATAATTTGA ATCTCAAATT TGAAGAGTTC
GAGGTTGGAG CCGAACGGTA TCTAAAATCT GGAGAATTAA TCCCAGACTT TCTATTGAAA
CGATTAGAAA CCTTCGATGC CATATATTTG GGTGCAGTAG GGGATCCAAG AGTACCAGCA
GGGATCTTGG AGCATGGGAT ACTATTAAAA TTACGATTTC ATTTTGATCA ATACGTCAAT
TTAAGACCAA TAAAGCTACT AAACGACAGG TTTTCGCCTT TGAAAAAGAA AGGCGTTAAT
GAGATCAATT TTACAGTAAT AAGAGAAAAT ACAGAAGGAC TTTACGCGGG TATTGGTGGA
ATTTTAAAAA AAGATACTCA AGACGAAGTA GCGATACAAG AGATGATTTC AACTAGAAAA
GGTGTAGAGC GTATCATCCG TTACGCTTTT GAGTTTGCAA AAAACAACAA AGGGAAACTA
ACACTCTGCG ATAAAAGTAA TGTACTTACT TATTCTCATG GCTTATGGTT GAGGGTATTT
GAAGAGTTAA AGAAGGAATA CCCAGACGTT CAGACTGATC ATTACTACGT AGATGCTATA
ACTATGAAAA TGGTACGAAA TCCAGAAATT TTTGATGTGA TAGTAACCTG TAACATGTTT
GGGGACATCA TCACAGATTT AGGAGCAGAA ATCCAGGGGG GAATGGGATT AGCTGCCTCA
GGAAATATTA ATCCCAACAG TGTTTCCATG TTTGAACCTG TTCATGGTTC AGCTCCCGAT
ATTGCTGGTA AAGGTATTGC AAATCCCATA GCTGCTATTT TAGCTGCAGC AATGATTTTA
GAATATTTTG GAAGAAAAGA CTTAGCTGAA AAAGTTGAAG GTGCGATTAA AACATCGATC
GATGAAAACT TACTTTCTCA AGACATGGGG GGAAATTTAA GCACCAGTGA AGTAGGAGAC
GAAATTGTCA AAATTTTAAA AAGAGGGTGA
 
Protein sequence
MPSIAVLPGD GIGKEVINEG LKILNFMGEK YNLNLKFEEF EVGAERYLKS GELIPDFLLK 
RLETFDAIYL GAVGDPRVPA GILEHGILLK LRFHFDQYVN LRPIKLLNDR FSPLKKKGVN
EINFTVIREN TEGLYAGIGG ILKKDTQDEV AIQEMISTRK GVERIIRYAF EFAKNNKGKL
TLCDKSNVLT YSHGLWLRVF EELKKEYPDV QTDHYYVDAI TMKMVRNPEI FDVIVTCNMF
GDIITDLGAE IQGGMGLAAS GNINPNSVSM FEPVHGSAPD IAGKGIANPI AAILAAAMIL
EYFGRKDLAE KVEGAIKTSI DENLLSQDMG GNLSTSEVGD EIVKILKRG