Gene Pmob_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1579 
Symbol 
ID5757864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1720925 
End bp1722103 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content36% 
IMG OID641302770 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001568598 
Protein GI160903017 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAAATA GTGACAAAGT GATCTTAAAA GTTGAAAATT TGAAAAAATA TTTTCCTGTT 
AGAGCCGGGG TCTTCAAAAG AACAGTCGCC CAAGTGCTAG CTGTAGACGA TATTAGTTTT
GAAATAAAAG AAGGCGAAAC TCTGGGGCTT GTTGGTGAGT CCGGTTGTGG TAAAAGTACA
ACAGGCATGA CAATCCTGAG ATTATACGAA CCAACAGATG GACGAATTAT AATGGAGGAA
CAAGACACTA CACCATGGTT CATGAAAGGT ACCACCGTTA ATAAGTATGT TAAGAAGATT
TATTCAGACA GATTTGAAAA AATGAAAAAA GAATTAGGTT CAGAAGAAGA AGTAATTAAG
AAATTAGATA ATCAAATAGA CAAAAAATAC GCACAGTTAT ATTTTCAAAA CGGAGTAAGT
GAAATAAGAA AAGATTTGTT GAATAATTTG GCTGAAAAAA GACGATCCTT TAGAAAAAAT
GCCCAAGTCA TCTTTCAAGA CCCCTATTCT TCCTTAAATC CAAGAATGAG AGTTCTGGAT
ATCATAGGAG AAGGTATGAA AGTTAATAAA ATGGGTACAG CTTCTGAAAT AAGAGATAGA
GTAGCTAACT TAATGGAAAC AGTAGGATTA TCGAAAGATT ATGTTTATAG GTATCCCCAC
CAATTTTCTG GTGGACAAAG GCAAAGAGTA GGGATAGCGC GTGCTTTGGC ATTGGACCCA
AAATTAATCA TTTCTGATGA AGCAGTTTCC GCTTTAGATG TTTCCATTCA ATCTCAGATA
ATAAATTTAA TGGTTGACTT GAAAAATGAT TACGGTTTAA CCTATGTTTT TATAGCTCAC
GATTTGGCCG TTGTGAAGCA CATAAGCGAC AGAATAGCGG TTATGTATCT AGGAAAGATA
GCTGAATTAA CAACGAAAAA AGAGCTCTTT GATGAGCCAT TACACCCTTA TACGGTTTCT
TTGATGTCGG CAATTCCTAT ACCAGATCCG GAAGTGAAAA AGAAAAGAGT GGTTTTACAA
GGTGATGTAC CAAGCCCTCT AAATCCACCC TCGGGTTGTA GATTTCATCC TCGTTGTCCA
ATTGCTAAAG ATATTTGTAG CAAAGAAGAA CCACCACTTA AAGAAGTTAA GCCAGGACAT
TTTGTATCAT GTCATTTTCC TGGTGAGTTT AAAATTTAA
 
Protein sequence
MPNSDKVILK VENLKKYFPV RAGVFKRTVA QVLAVDDISF EIKEGETLGL VGESGCGKST 
TGMTILRLYE PTDGRIIMEE QDTTPWFMKG TTVNKYVKKI YSDRFEKMKK ELGSEEEVIK
KLDNQIDKKY AQLYFQNGVS EIRKDLLNNL AEKRRSFRKN AQVIFQDPYS SLNPRMRVLD
IIGEGMKVNK MGTASEIRDR VANLMETVGL SKDYVYRYPH QFSGGQRQRV GIARALALDP
KLIISDEAVS ALDVSIQSQI INLMVDLKND YGLTYVFIAH DLAVVKHISD RIAVMYLGKI
AELTTKKELF DEPLHPYTVS LMSAIPIPDP EVKKKRVVLQ GDVPSPLNPP SGCRFHPRCP
IAKDICSKEE PPLKEVKPGH FVSCHFPGEF KI