| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1579 |
|---|
| Symbol | |
|---|
| ID | 5757864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1720925 |
|---|
| End bp | 1722103 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641302770 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001568598 |
|---|
| Protein GI | 160903017 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAATA GTGACAAAGT GATCTTAAAA GTTGAAAATT TGAAAAAATA TTTTCCTGTT
AGAGCCGGGG TCTTCAAAAG AACAGTCGCC CAAGTGCTAG CTGTAGACGA TATTAGTTTT
GAAATAAAAG AAGGCGAAAC TCTGGGGCTT GTTGGTGAGT CCGGTTGTGG TAAAAGTACA
ACAGGCATGA CAATCCTGAG ATTATACGAA CCAACAGATG GACGAATTAT AATGGAGGAA
CAAGACACTA CACCATGGTT CATGAAAGGT ACCACCGTTA ATAAGTATGT TAAGAAGATT
TATTCAGACA GATTTGAAAA AATGAAAAAA GAATTAGGTT CAGAAGAAGA AGTAATTAAG
AAATTAGATA ATCAAATAGA CAAAAAATAC GCACAGTTAT ATTTTCAAAA CGGAGTAAGT
GAAATAAGAA AAGATTTGTT GAATAATTTG GCTGAAAAAA GACGATCCTT TAGAAAAAAT
GCCCAAGTCA TCTTTCAAGA CCCCTATTCT TCCTTAAATC CAAGAATGAG AGTTCTGGAT
ATCATAGGAG AAGGTATGAA AGTTAATAAA ATGGGTACAG CTTCTGAAAT AAGAGATAGA
GTAGCTAACT TAATGGAAAC AGTAGGATTA TCGAAAGATT ATGTTTATAG GTATCCCCAC
CAATTTTCTG GTGGACAAAG GCAAAGAGTA GGGATAGCGC GTGCTTTGGC ATTGGACCCA
AAATTAATCA TTTCTGATGA AGCAGTTTCC GCTTTAGATG TTTCCATTCA ATCTCAGATA
ATAAATTTAA TGGTTGACTT GAAAAATGAT TACGGTTTAA CCTATGTTTT TATAGCTCAC
GATTTGGCCG TTGTGAAGCA CATAAGCGAC AGAATAGCGG TTATGTATCT AGGAAAGATA
GCTGAATTAA CAACGAAAAA AGAGCTCTTT GATGAGCCAT TACACCCTTA TACGGTTTCT
TTGATGTCGG CAATTCCTAT ACCAGATCCG GAAGTGAAAA AGAAAAGAGT GGTTTTACAA
GGTGATGTAC CAAGCCCTCT AAATCCACCC TCGGGTTGTA GATTTCATCC TCGTTGTCCA
ATTGCTAAAG ATATTTGTAG CAAAGAAGAA CCACCACTTA AAGAAGTTAA GCCAGGACAT
TTTGTATCAT GTCATTTTCC TGGTGAGTTT AAAATTTAA
|
|---|
| Protein sequence | MPNSDKVILK VENLKKYFPV RAGVFKRTVA QVLAVDDISF EIKEGETLGL VGESGCGKST
TGMTILRLYE PTDGRIIMEE QDTTPWFMKG TTVNKYVKKI YSDRFEKMKK ELGSEEEVIK
KLDNQIDKKY AQLYFQNGVS EIRKDLLNNL AEKRRSFRKN AQVIFQDPYS SLNPRMRVLD
IIGEGMKVNK MGTASEIRDR VANLMETVGL SKDYVYRYPH QFSGGQRQRV GIARALALDP
KLIISDEAVS ALDVSIQSQI INLMVDLKND YGLTYVFIAH DLAVVKHISD RIAVMYLGKI
AELTTKKELF DEPLHPYTVS LMSAIPIPDP EVKKKRVVLQ GDVPSPLNPP SGCRFHPRCP
IAKDICSKEE PPLKEVKPGH FVSCHFPGEF KI
|
|---|
| |