Gene Pmob_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1578 
Symbol 
ID5757832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1719906 
End bp1720925 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content39% 
IMG OID641302769 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001568597 
Protein GI160903016 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGATA ATAATAGCGA ACCTATACTT CGTGTTAATA ATTTGCATGT TCATTTTAAA 
ACAGAGGACG GAATAATAAA GGCCGTCAAT GGTGCAAGTT TTGAGCTTTA TCCAGGTGAG
ACTTTGGCAA TAGTGGGAGA GTCTGGTTCA GGCAAAACAG TTACTGCGTT AAGCACTATA
AGGCTACTAG ACGAAAACGG ATGGATCGCT GAAGGAGAAA TAAAGTACAA AGATACTGAT
GTTTTATCTT TATCGGACAA CCATCTCAGA AGGATACGCG GTAAAGAGAT TTCCATGATC
TTCCAAGAAC CTATGACTGC ACTTAACCCA GTTTACACTG TTGGGGAGCA GATCATGGAA
TCTCTTGAAC TACATCTTAA TATGAACGAA AAAGAAGGTA AAAAAAGAGC GATTGATTTA
TTAAGAAAGG TCGGCATTCC CGAACCAGAA AGGCGAATAG ATCAATATCC TCACGAATTG
TCTGGTGGAA TGAGACAGAG AGCTATGATC GCTATGGCGT TAGCTTGCAA CCCTTCCATT
CTTATAGCAG ATGAACCAAC TACCGCATTG GATGTTACCA TTCAGGCACA GATACTGGAA
CTTATGAAGG ATTTACAAAA TGAATTTAAA ATGTCCATAA TTTTTATCAC ACATGATCTG
GGAGTAATTG CTGAAATGGC TGACAGGGCA TTAGTTATGT ATGGTGGTGA AGTGGTTGAA
AGTGGTGAAA TCAAAACTAT TTTTAAAAGG CCACGTCATC CCTATACATG GGGCTTGATG
AATTCAATTC CCAGAATAGA CAAGGAAGAG GAGAGGTTGC TTTCTATTCC TGGAGTTGTT
CCAAATCCCT TGAACTTTCC AAAGGGTTGC AAATTTTCAA ATAGGTGTTT TTTTGCTGAT
CAAAAATGTG TAGATGAAGA TCCTAACTTG GAAGAAGTAG AACCTCGCCA TTTTTCCCGT
TGTTGGCACA TAGACAAATT ATTGGACGAA ATGAACAAAG TCAAAGAAGG TGAAGTATAG
 
Protein sequence
MKDNNSEPIL RVNNLHVHFK TEDGIIKAVN GASFELYPGE TLAIVGESGS GKTVTALSTI 
RLLDENGWIA EGEIKYKDTD VLSLSDNHLR RIRGKEISMI FQEPMTALNP VYTVGEQIME
SLELHLNMNE KEGKKRAIDL LRKVGIPEPE RRIDQYPHEL SGGMRQRAMI AMALACNPSI
LIADEPTTAL DVTIQAQILE LMKDLQNEFK MSIIFITHDL GVIAEMADRA LVMYGGEVVE
SGEIKTIFKR PRHPYTWGLM NSIPRIDKEE ERLLSIPGVV PNPLNFPKGC KFSNRCFFAD
QKCVDEDPNL EEVEPRHFSR CWHIDKLLDE MNKVKEGEV