| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1528 |
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| Symbol | |
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| ID | 5757154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | - |
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| Start bp | 1651275 |
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| End bp | 1652180 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641302722 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_001568552 |
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| Protein GI | 160902971 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000383307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA ATCAAATTGG TTTAGCTCCG ATGGCTGATT ATACAGATTA CCCTTTTAGA
GAGATTTGCA GAAGGTTTGG GGCCAAGTTT ACTTTCACTG AAATGATTTC CGTAGATTCA
ATAATAAGAG AAAACGAAAA AGTTGAAAAA ATGCTTCCTC AGAAGGGCGA AGATAATATA
GGCGTACAAC TTTTTGGCAA TGAGACAACA AAATTTATCG AGGCAGCCAA ATCCATCCAG
CATTTAGCTA GTTGGATAGA TATAAACGCT GCTTGTCCTG TCAATAAAGT AGTGAAAAAA
GGTTCAGGGG CAGCTTTATT GAAAAATCCA AAATTATTAG GGGATATAGT TTTTAATTTA
AAAAAGAGTA TTGATTTGCC AGTTGGAGTA AAGGTAAGAT TAGGATACGA TCAAATAAAT
ATAGAAGAAG TAGCTGAAAC AGTGGAAAAA GCAGGTGCTG ATTATATTAT TGTTCATGGT
AGAACTAGGT CACAAATGTA CAGTGGGATC GCAAATAGAG AAATATTAAA AAAGTTAAAA
GCGAAGATCA CTATACCTTT AGGGGCTAGC GGAGATGTGT TTAGTAAAAA AGATATAGAT
GATTATTTGT TGAATTATGG TGCAGATTTT GTTTTAGTAG CAAGGGGTGC TATCGGTAAC
CCTTGGATAT TCACAAAGAA TAATTATAAT CCGACTATAG ATGAAAGAAT CGATACTTGC
TTAGAGCACT TGAAACTTAT GATTGAATTT TATGGTTCAG AGGTCTATGC AGTAAAAAAA
TTCAGAAAAG TATTAATGAA ATACTTTTCT GGGATTGAAG GTGCAAAAGA GATAAGAAGA
AATTTAGATC TACTTTTATC TTATAATGAT GTCGCCGAAA TGGTTTATAA AACATTAAAA
CGTTAA
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| Protein sequence | MLENQIGLAP MADYTDYPFR EICRRFGAKF TFTEMISVDS IIRENEKVEK MLPQKGEDNI
GVQLFGNETT KFIEAAKSIQ HLASWIDINA ACPVNKVVKK GSGAALLKNP KLLGDIVFNL
KKSIDLPVGV KVRLGYDQIN IEEVAETVEK AGADYIIVHG RTRSQMYSGI ANREILKKLK
AKITIPLGAS GDVFSKKDID DYLLNYGADF VLVARGAIGN PWIFTKNNYN PTIDERIDTC
LEHLKLMIEF YGSEVYAVKK FRKVLMKYFS GIEGAKEIRR NLDLLLSYND VAEMVYKTLK
R
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