| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1489 |
|---|
| Symbol | |
|---|
| ID | 5758249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1605125 |
|---|
| End bp | 1607818 |
|---|
| Gene Length | 2694 bp |
|---|
| Protein Length | 897 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641302684 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001568515 |
|---|
| Protein GI | 160902934 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0383] Alpha-mannosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACTACA TCATTTCACA CACTCATTGG GATAGAGAAT GGTTCGCTCC CACTGACGCA
ACAAAAAAAA TGTTACCAAG TTTATTTCAA AAACTCTTCC AGTTAATTGA TAATAATCCT
GAATACAAAT TCGTGTTAGA TGGGCAAATG TTGCTGGTGA AAGATTATCT AAGCAATTTT
CAAGGAGAAG AACGAAAAAA AGCAGAAGAC GAATTGAAAA AATACTCTAA AAACATAGCT
TTTGGGCCAT ACTACGGACA AATTGATTGG AGAGTCTCTG AAGAAAGCTC AATTAGAAAT
ATTATATTGG GTAATCAGGA AGCTAAAAAG TTTGGAAATA TTATGAAGAT AGGTTGGTTA
TTGGATAATT TTGGCTTTTT GTCTCAAGTT GCACAAATTA ATTCTCAATG TGAAATAGAA
AGTTGTTTCC TCTGGAGAGG TTTAAAAATG AAATTTCCAA AAATTGGGTT TACTTGGAGC
AGTCCTGATG GTAGCAAAAT TCATGGAATA TATTTACTAG ATAGTTATAG GAATATCATG
AGGTTGAAAG ATTATCCAGA AGTTATGGAA AAAAGATTGG AGTTGGAAAT TAACAAGCTA
AAAAAATATT CAAAAACTAA TTACCTTCCT TTACTAAATG GATACGACCT GGACCCTGTG
CCAGAAGATC CCACTGATGG AGAATTAAAA ACAGTTTTTC CAGATGAGTT TATAAAAGAG
TATTTTAACC AAGAAGACCC ATCTTTAATT GGAGAATACG TTGGTGAACT CATGGATGGA
AGTATTGTTT CGGTATTTCC TGGTAGTTTA TCAACAAGAC AGTATTTAAA AATTATGAAT
TGGCATTCTG AATATATCCT CTCTAAAGTA TTAGAGCCGT TAATTGCTAT CGTAGATAAT
TCTGAATACG ATAAAGAGAT ACAAAAGGCT TGGGAATATT TAGTGATGAA CTTAGTCCAC
GACAGCATAG GCGGAGTAGG AGTAGATCAG ATTCATGAAG ACATGGAAGA AAGATACAAT
AAAATTAAAG AGATTTTTGA ATCAACTTTA AATAAAGTTT TGGATAAGGT AGATCAGGTT
TTACCTTTAG GTTACACTTG CCTAAATTTG AATCCTCAGG AATTGCCTGT ATTATTTGAA
AATAAAGAAA CCCTTTATAG ATTTTCTGCA CCATCAGGTA TTTTATCAAA AGTTGATTTA
AAAAAGTATA AAGTAAGATA TTGGGAAAAA CCCATAAATA GTTTTCATTG GGAGAACAAA
CATTTCAAAG CCATCGTCGA AAATGGGAAA CTTCATATTA AAAAGGAAAA TAAGGATTAT
TTAATCAAAC CAGTTTTGGT AGAAGACAAG GGTGATGAAT ACTCTTCTGC CTTTGATAAA
GAACTGAACT TAACTTTCTC AGGAATGAGA TTGAAAGCAC GATCAGATAA CTACTCCAAA
ATAGCTCTTG ATTTTACCAG TAAAGAAGTT GATTTCACCC TTTCTTTGAC ATTTTCAGAA
TTGCCCTATA TCAACATCGA AATTGAATCT TTGGGAAAAG GATCAGATTA TGGATTACTT
TTATCCTTAA TCGGAGGTGG AGATATAAAT GCCGGTGCTC CTTTTGATTC TGTAAAAAGA
CCATACGAAA TAAAATATGA GGAACCTGAA GAAGAAATGA AAAAGTTTTT AGTTGCTGCA
AGAGAAATCG CTTTTAATAA CGTTTTTCCT ATGAAGGACT ACGTTGGTTT AGAAAAGGAT
GACTATTTTG CAGCCTTTAT GGCAAAAGGG ATTTATAGTT ATACCACACA TTCTACGACA
TCCTTGACCC CGTCTGGGGC GTTTTCTTCA AAAAAAGCTG TTTCTTTAAT TTTATTAAGA
TCCGTAAGTT GGCTTTCTCT CGAAAACGTA AAAGGAAGAA TTGGAGATGC CGGTCCCGTA
ATGTATACTC CTGGAGCAGA AGTAAAAAGA AAAATGAAAA TCGAGACCGC CTTTTGTATA
TCACCAAAAA ATGATTTTTT GAAATACAAA AATTCCTTTA TCAATCCACC TTTATTGTTT
TATAAACATA TTAATAATTC AAGCTTAGAA AACCAGGCCA GGGTGGTTCA TAAATTCTAT
TCTTCAGTGG ACGAAAATAT AGAATTTGTG AATATGAAAC CCTCAATAGA CAAAGAAGGG
ATGACTCTAC GGTTTTTTAA TCCTACTCAC AAGAAAAAAG AGATAAGATT ACCTCAAAAA
GCAATAAAAA CCGATTTGTT AGAGAACGAA TTAGAAGAAT TTGATGGGAC GATCAAGCCA
AAAGAGATAT TAACGTTAAA AATACCTAAG CTATCTTTAA ATACTTTTTC TGATGATCAA
GGCTCAAAAG TTAACATCGT ATATCCTAAA TTTACGTGGG ATATCTCTGA AGATCTTTCA
AAACCGGATA TAAGTATAAT AAATAAAATG GAAAGAGAAG TCAGAGATCT TAAAGAACAA
ATAAAGGATG TAGATAAGAA AATAAAGGAA ACTCAAGGTA TTAGTAGATA CGAATTGCAT
TTTGAAAAGT ATAAATTAAT GAGAAAAGCG TTAGAATTAG AGTTATCCTC GTTATATAAC
AGATCTAAAA TTGAACGTGT GGATTCTTCA AAAATAGAAC ATATAATTGT AAAGTTGAAC
GATGTAAGAA TAAAAAGAAG GGGAATAGAG TTTTTACTAG CCACTCTCAA ATAG
|
|---|
| Protein sequence | MYYIISHTHW DREWFAPTDA TKKMLPSLFQ KLFQLIDNNP EYKFVLDGQM LLVKDYLSNF
QGEERKKAED ELKKYSKNIA FGPYYGQIDW RVSEESSIRN IILGNQEAKK FGNIMKIGWL
LDNFGFLSQV AQINSQCEIE SCFLWRGLKM KFPKIGFTWS SPDGSKIHGI YLLDSYRNIM
RLKDYPEVME KRLELEINKL KKYSKTNYLP LLNGYDLDPV PEDPTDGELK TVFPDEFIKE
YFNQEDPSLI GEYVGELMDG SIVSVFPGSL STRQYLKIMN WHSEYILSKV LEPLIAIVDN
SEYDKEIQKA WEYLVMNLVH DSIGGVGVDQ IHEDMEERYN KIKEIFESTL NKVLDKVDQV
LPLGYTCLNL NPQELPVLFE NKETLYRFSA PSGILSKVDL KKYKVRYWEK PINSFHWENK
HFKAIVENGK LHIKKENKDY LIKPVLVEDK GDEYSSAFDK ELNLTFSGMR LKARSDNYSK
IALDFTSKEV DFTLSLTFSE LPYINIEIES LGKGSDYGLL LSLIGGGDIN AGAPFDSVKR
PYEIKYEEPE EEMKKFLVAA REIAFNNVFP MKDYVGLEKD DYFAAFMAKG IYSYTTHSTT
SLTPSGAFSS KKAVSLILLR SVSWLSLENV KGRIGDAGPV MYTPGAEVKR KMKIETAFCI
SPKNDFLKYK NSFINPPLLF YKHINNSSLE NQARVVHKFY SSVDENIEFV NMKPSIDKEG
MTLRFFNPTH KKKEIRLPQK AIKTDLLENE LEEFDGTIKP KEILTLKIPK LSLNTFSDDQ
GSKVNIVYPK FTWDISEDLS KPDISIINKM EREVRDLKEQ IKDVDKKIKE TQGISRYELH
FEKYKLMRKA LELELSSLYN RSKIERVDSS KIEHIIVKLN DVRIKRRGIE FLLATLK
|
|---|
| |