| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1468 |
|---|
| Symbol | glyA |
|---|
| ID | 5757780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1582160 |
|---|
| End bp | 1583431 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641302662 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001568494 |
|---|
| Protein GI | 160902913 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGAAG ATTTAAAGAG TTCTGATAAC GAAGTTTACG AGATTCTTCA AAAAGAGCTT
AAAAGGCAAG AGTATGGTTT AGAATTGATT GCATCAGAGA ATTATGCGTC AAAATCTGTT
ATGGAAGCCG CAGGAAGTAT TTTTACGAAT AAATATGCCG AAGGTTACCC AAAAAGAAGA
TATTATGGAG GATGTGAATA TATAGACGAG GTTGAGACGC TTGCTCGGGA TAGAGCAAAA
GAACTTTTCA ATGCAAAGTT TGCGAACGTT CAACCCCATT CAGGGTCCCA AGCGAATATG
GGCGCTTATC TAGCGCTTAT GAAACCTGGG GATACATTAA TGGGAATGTC GTTGAGCCAT
GGTGGCCATC TAACCCATGG CGCTCCAGTA AATTTCTCAG GTATGTTGTT CAATGTTGTT
TCTTATGGTG TCGATGAAGA AACGGAAACA ATCAATTATG ATGAGGTTGA AAGAATAGCG
AAGGATGCAA AACCTAAAGT TATTGTGGCA GGTGGGAGTG CATACTCTAG GATAATAGAT
TTTAAAAGAT TTAGAGAGAT AGCCGATGAA GTTGGTGCGT ATTTAATGGT TGATATGGCC
CATTTTGCAG GATTAGTTGC CGCTGGTATT CATCCAAACC CAGTTGAGTA CGCGCATGTC
GTTACTTCGA CAACGCATAA AACTTTAAGA GGGCCAAGAG GTGGGATTAT TCTCACAAAC
GATAGTGATA TTTACAAATC AATCAATAAA ATTATTTTTC CAGGGATACA AGGCGGTCCC
TTAGAACATA TAATAGCGGC AAAGGCTGTT GCTTTTAAAG AAGCTATGAG TGGAGAGTTC
AAAGAATATC AGAAACAAGT TGTTAGAAAT TCTAAAGCTT TAAGCAATGA ACTTGCTAGT
AAAAATTTGA GAATCGTCTC AGGTGGAACG GATACGCATT TGTTCTTGGT GGATCTATCT
GAGCTTAATA TAACAGGGAA AGCCTTGGAA AAGGCTTTAG GGCAATGCGA TATTACAGTT
AATAAGAATA CTGTTCCCAA AGAAACGTTG TCGCCTTTTG TGACTAGTGG AATAAGGATT
GGTACCCCTG CGGTTACCAC ACGTGGTATG AAAGAAGAAG AAATGAAAGA AATCGCTTCA
ATGATAGCAA AAGTTGCAAA CAATGTTCTT GATGAAGAAG GGAATATAGA TAAAGATTTA
GCACAAGAAA TTAAAAAAGA TGTTGTTTCT CTCTGTCAAC GTTTTCCAAT GTATGCAGAT
TTGATTGAGT GA
|
|---|
| Protein sequence | MWEDLKSSDN EVYEILQKEL KRQEYGLELI ASENYASKSV MEAAGSIFTN KYAEGYPKRR
YYGGCEYIDE VETLARDRAK ELFNAKFANV QPHSGSQANM GAYLALMKPG DTLMGMSLSH
GGHLTHGAPV NFSGMLFNVV SYGVDEETET INYDEVERIA KDAKPKVIVA GGSAYSRIID
FKRFREIADE VGAYLMVDMA HFAGLVAAGI HPNPVEYAHV VTSTTHKTLR GPRGGIILTN
DSDIYKSINK IIFPGIQGGP LEHIIAAKAV AFKEAMSGEF KEYQKQVVRN SKALSNELAS
KNLRIVSGGT DTHLFLVDLS ELNITGKALE KALGQCDITV NKNTVPKETL SPFVTSGIRI
GTPAVTTRGM KEEEMKEIAS MIAKVANNVL DEEGNIDKDL AQEIKKDVVS LCQRFPMYAD
LIE
|
|---|
| |