| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1461 |
|---|
| Symbol | |
|---|
| ID | 5757886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1576020 |
|---|
| End bp | 1577057 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641302655 |
|---|
| Product | ApbE family lipoprotein |
|---|
| Protein accession | YP_001568487 |
|---|
| Protein GI | 160902906 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGGCAGA AAAATATGCA TAGTTTAAGA GTATATCTTT ATATAGCTGC ACTTGGTGTA
GGAGTACTTT TGTTATCTTT GTTGTTATTT TCTAAGCCGA CCCCAGTTTA CGAAGAAAAA
GAGTTCCCAG TACTTGGCAC TATTGTAAGG GTAAAAGTAG CAGGGGATAA AGTATCTTCA
AATGTTTTGT TGAATACAGC AGAACAAGAG TTGTACAGAT TACACAACAA ATTTAGTCCC
AACGTCGAAG GTAGTATAAT CCAAAAATTA AATACTGACA GAAAGGTTGA AGTCGACGAA
GAGGGATTAT TTTTATTTCA AGCTACCTAC AATTATGCAG TAATAACAGG TGGGGCTTTC
GACCCTACAG TGAGACCTTT ACTTAAATTG TGGGGATTTG ATGACATAAA TTCTCCAAAA
AAAGTTCCAA TCCAAGAAGA AATCAATAGA ACATTAGAAA ACGTTGATTA TAGATTCATA
AAAATTGATG AAGAAAAGAG AGAAATTTCT TTACTAAAAG ATGGTGTCGA AGTAGACTTA
GGAGGAATAG CTAAAGGATA TGCAATTGAT TTAGTTATAC AAAAAATTAA GGAAATAGAT
CCTGGAGCTA CAGGTTTTGT CGATGCGGGG GGAGATATTG GAATAATAGG TCCAAAGTTT
GGAGAACTTG CCTGGGTTAT AGGGATAAGG GATCCTTTTT CACAAGATGC CTTAAAATCG
ATAGATACAA TTTATTTAAC AAGCGGTGCT GTTGCCACAT CTGGAGATTA CGAAAGATTT
TTTATCGAAG ACGGTAAAAA ATATCATCAT ATATTAGATC CAGAAGATGG TTATCCTGCA
GGAAACGCAT CCAGTGTAAC TGTTATAGCA GAAAAAGCGA TGATAGCGGA CGTCTTTTCT
ACGGCTCTTT TCGTTTTAGG ATACGATAAC CCTGCCTTAG ATTATTTCAC AGATTTTGGC
ATTCAAGCTT TGATTATATC TCCAACAGGG GAAAGTACTG AGACAAGTGG TTTTGACTAT
TTTCGGGAGA AAATGTGA
|
|---|
| Protein sequence | MRQKNMHSLR VYLYIAALGV GVLLLSLLLF SKPTPVYEEK EFPVLGTIVR VKVAGDKVSS
NVLLNTAEQE LYRLHNKFSP NVEGSIIQKL NTDRKVEVDE EGLFLFQATY NYAVITGGAF
DPTVRPLLKL WGFDDINSPK KVPIQEEINR TLENVDYRFI KIDEEKREIS LLKDGVEVDL
GGIAKGYAID LVIQKIKEID PGATGFVDAG GDIGIIGPKF GELAWVIGIR DPFSQDALKS
IDTIYLTSGA VATSGDYERF FIEDGKKYHH ILDPEDGYPA GNASSVTVIA EKAMIADVFS
TALFVLGYDN PALDYFTDFG IQALIISPTG ESTETSGFDY FREKM
|
|---|
| |