Gene Pmob_1431 details

Gene Information

• Locus tag: Pmob_1431
• ID: 5758010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: -
• Start bp: 1537929
• End bp: 1539920
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641302623
• Product: alpha amylase catalytic region
• Protein accession: YP_001568457
• Protein GI: 160902876
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.246388
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAG CATTATTCGT TGTCATGATA CTTACTTTTG CTGTTGTTTC TTTTTCTGTT 
AGCACTACGT TTTTATACTC AAAAGAAGCA ACTTCTGTTT ATTTAGTTGC CAGTTTTAAC 
AACTTTCAAC CTATTCCTAT GGACAAAAGC TTCACGGGAC TGTGGCGTTA TAACGTTGAT 
TTAGAACCTG GCAAATACCT GTATAAATTC ATCGTAGATG GAAAAAGAAC GATAGATTTT 
TCAAACGAGG ATATAGAAAC CTATAACGGT GAAATCTTCA ATGTACGCAC CGTTCAGGAA 
TCGTTTGTCT TGCCAAAAGT TGGAGACGGC TCAATTAAAA AGGTTTATTT CGATAACGAA 
AGAAGATATA TAAATCCGGT TCAAAAGGGC GAAATATATC TTTCAATAGA ATTCGAAAAA 
AATGATGTTG AAGACGTTGA ACTACAAGCC AACGCATCCT CCATACAAAA ATCTGTAATA 
GAATCAAGCA ACACCGTCAT TTATAGGTTC CACGTATTTA CCGAAGCTGA AGTTTTAAAG 
TATAGATTTT TGATCTACGA CAGCGAAGAA ATAATATACG GTTTCAACGG AACAGAAGAG 
TTTTTTGAAT TCGACTTTAA TCATCCTATA ATTTCATATT TTGATATACC AGAATGGTCT 
AAAGGAAGGA TCTATTATCA AATATTTCCT GATAGATTCA GAAATGGTGA TACTTCCAAT 
GATCCACAAG GAACCTACAG TTGGAACGGT CCACATAATA GAAATTCTCT TTCTTTTGGT 
TTTTATGGTG GAGATCTGCA AGGGGTCATT GACTCAATTG ATCATTTAGA ATACATTGGT 
GTGGAAGCCA TCTACTTCAA CCCCATTTTT GAAGCTCAGA CTCCCCATAA ATACGATACA 
ACAAATTATT TAAAAATTGA TGATTCTTTT GGAGACGAAG AAGTCTTTTC TAATATGCTA 
GAAGCGTTAC ATGAGTCAGA TATCAAAGTA ATCTTAGATG GCGTATTTAA TCATACAGGA 
ACAGAATTCT TCGCGATGAA AGAAAACTTT CTCAAACAAG AAGAATCTGA TTATTTGGAC 
TGGTACTATA TTAAATCATT CCCCATCAAA AAATCTACAG AAAGTTACGA AGGTTGGCAT 
GGGTACGCTG ATCTCCCGCA ATTAAACAAT GAAAATCCTG AGGTGAAGGC ATACATAAAT 
CAGGTAATTG GTAAATGGAT GAGTTTTGGT ATAGATGGTT GGAGAATGGA TGCGGTTGAT 
CAACTCCCTG AAACTTATTG GTCAGCTCTT TACGAAAACA TTAAAAACAT AAACCAAGAA 
GCCCTAGTTG TCGGAGAATT TTGGAGAGAT GCCACTTCTT ATTTTGAAGA TCCAAGTTTC 
GACTCTGTAA TGAATTACAT CTTCAGAGAT GCGGCTATCG CATATGCCAA AGGTGGAAGG 
GCTATTAACT TTGTTAATAC CACTAACGCA TATATAGACA AATATCCACC ACAAGTGTTG 
CATGGGTTAT GGAACCTTTT GGGTTCACAC GATACTGAAA GAATTCTAAC TGCTCTCGGT 
GAAGATACAC AACGAATGAA ATTAGCTGTC GTACTTCAAA TGACGTTTAT AGGGTCACCT 
CTAATATATT ATGGTGATGA GATAGGCATG ACGGGGACCA CAGATCCATT TTGCAGAGTT 
CCATTTTACT GGGATGATAG TAAGTGGAAT ATGGAAATTT TAGACTTGTA CTCTCAGTTG 
GCGGAATTAA GAAAAGAAAG TGATGCCTTG AGAAAAGGTG ATTATACAGT ACTGTATGCA 
GATGAAAGTG TTCTAATTTA TGAAAGACGC TATCAATCAG AGAATGTCAT AATTGCACTA 
AATTCTAAAG ATTCACAAAT TGAAATTGAG TACGATTTGA ACGGAAGTTA CAGAGATATC 
TTAACTGGAG AAAGCTTTAA TACCATAGAA AAAATGCCAG GTAAAAGTTT TCTTGTACTT 
GTTAGCGAGT GA 

 

Protein sequence

MKKALFVVMI LTFAVVSFSV STTFLYSKEA TSVYLVASFN NFQPIPMDKS FTGLWRYNVD 
LEPGKYLYKF IVDGKRTIDF SNEDIETYNG EIFNVRTVQE SFVLPKVGDG SIKKVYFDNE 
RRYINPVQKG EIYLSIEFEK NDVEDVELQA NASSIQKSVI ESSNTVIYRF HVFTEAEVLK 
YRFLIYDSEE IIYGFNGTEE FFEFDFNHPI ISYFDIPEWS KGRIYYQIFP DRFRNGDTSN 
DPQGTYSWNG PHNRNSLSFG FYGGDLQGVI DSIDHLEYIG VEAIYFNPIF EAQTPHKYDT 
TNYLKIDDSF GDEEVFSNML EALHESDIKV ILDGVFNHTG TEFFAMKENF LKQEESDYLD 
WYYIKSFPIK KSTESYEGWH GYADLPQLNN ENPEVKAYIN QVIGKWMSFG IDGWRMDAVD 
QLPETYWSAL YENIKNINQE ALVVGEFWRD ATSYFEDPSF DSVMNYIFRD AAIAYAKGGR 
AINFVNTTNA YIDKYPPQVL HGLWNLLGSH DTERILTALG EDTQRMKLAV VLQMTFIGSP 
LIYYGDEIGM TGTTDPFCRV PFYWDDSKWN MEILDLYSQL AELRKESDAL RKGDYTVLYA 
DESVLIYERR YQSENVIIAL NSKDSQIEIE YDLNGSYRDI LTGESFNTIE KMPGKSFLVL 
VSE