| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1357 |
|---|
| Symbol | ruvB |
|---|
| ID | 5758230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1462656 |
|---|
| End bp | 1463711 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641302550 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001568384 |
|---|
| Protein GI | 160902803 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAA AAGAAAATAC AAACCCAAAG AGGTTACTGG ATCCCTCTTT TATTGGTGAG
GATACAGGAT CAAAGAAATT AAGACCAAAT TACTTGAATG AATTTATAGG CCAGGACAAC
ATAAAAAAAA AGTTAAAGGT CGCGATAGAA GCTGCTAAAA TAAGAAAAGA AGCGATGGAT
CATGTAGTTT TAGCAGGTCC TCCTGGTTTA GGTAAAACAA CCCTAGCTTA TGTAATTTCA
AATGAGCTAG GTGCTAATTT GCAAATTACA AGCGGTCCTG TAATCGAAAA AGCAGGAGAC
CTCGCTGCCA TCTTAACCAA CTTAGAAAAT GGCGACGTAC TATTCATAGA CGAGATCCAC
AGGCTGAATA GAACCGTGGA AGAAATCTTA TACTCAGCTA TGGAGGATTT TCAACTTGAC
ATTGTTATTG GGAAAGGTCC TTCTGCTCGT TCTATTAGGA TTGACTTACA ACCTTTCACC
TTGGTAGGAG CCACTACCCG ATTAGGCCTT ATAGCCCCAC CATTGAGAAG TAGGTTTGGC
ATAATTTTGG AAGTCGATTT CTACTCTCCA AAAGACCTCA ACTTAATCAT AAAAAGGAGT
GCAGACATAC TCAATATAAA AATAAAAGAA GATGCATCTC TCATTCTAGC TCAAAGATCT
CGGGGAACCC CCAGGATCGC CAACAGACTC TTGAGAAGAG TTAGGGATTT TGTCCAAGTT
TCTGGAAAAA ACATCATAGA AGCTGAAGAT GTGGACAACA CAATGAAATT ATTAGAAATG
GATGAAGATG GCTTAGATAA AATGGATCGA AAAATTCTTA AAACAATAAT AGAAAACTAT
GAAGGTGGGC CGGTGGGTAT AAATGCCTTA GCTTCATCGA TTGGGATAGA ACCCGATTCA
ATCAGTGAGG TCTATGAACC ATTTCTACTA CAAGCAGGTT TCATTATCAG GACCCCTCGA
GGTAGGGTGG CAACTGAAAA AGCCTACCAA AAACTAAATT ACACCTATAA AACTTCCAAT
CACAATATCA GTTTATGGGG GGAGCTTAAT GAATAA
|
|---|
| Protein sequence | MIEKENTNPK RLLDPSFIGE DTGSKKLRPN YLNEFIGQDN IKKKLKVAIE AAKIRKEAMD
HVVLAGPPGL GKTTLAYVIS NELGANLQIT SGPVIEKAGD LAAILTNLEN GDVLFIDEIH
RLNRTVEEIL YSAMEDFQLD IVIGKGPSAR SIRIDLQPFT LVGATTRLGL IAPPLRSRFG
IILEVDFYSP KDLNLIIKRS ADILNIKIKE DASLILAQRS RGTPRIANRL LRRVRDFVQV
SGKNIIEAED VDNTMKLLEM DEDGLDKMDR KILKTIIENY EGGPVGINAL ASSIGIEPDS
ISEVYEPFLL QAGFIIRTPR GRVATEKAYQ KLNYTYKTSN HNISLWGELN E
|
|---|
| |