Gene Pmob_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1333 
Symbol 
ID5757858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1429603 
End bp1430634 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content37% 
IMG OID641302526 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001568360 
Protein GI160902779 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATG AAATTATAAT GACTGTAAAA AATTTGAAAA AATGGTTTCC CTTGCGAAGA 
ACCATTTCAG AAATATTTCA AGGCAAACGA AGATGGGTTA GAGCGGTGGA TAATGTAAGT
TTTGATATAA GAAAGGGAGA GATATTTGGC TTAATTGGAG AATCTGGTTG CGGAAAATCT
ACTACAGGTA GATTATTGAT GAAATTAGAA GAACCCACAG AGGGCCAAAT AATATTTAAG
GGTGAAGATG TTACTTTTTT GTCTTCCACT GAGGAAATTA AGAAGTATAA AGAAGATGTA
CAAATGATTT TTCAGGACCC TTACTCTTCG ATGAATCCAA GGTTTAGAGT TAGAGATGTT
TTGGCAGAAC CTTTGATCAT TCATAACAAA ACCAAAGATC CTAATGAAAT TGAAGAGATA
GCAAAGAATG TTCTAAATGA AGTTAAATTG ACGCCTCCTG AAGAGTTTAT GGATAGATAT
CCTCACATGC TCAGCGGAGG GCAAAGGCAA AGAGTTGCAA CGGCAAGGAC CTTAGTTCTT
TCTCCGGATT TCATAATAGC GGATGAACCC GTTTCTATGA TCGATTTATC AACTAGGGCA
GAAATTCTCC ACATGATGAA AGATGTTCAG CAAGATTTAG GGCTTACGTA TCTATACATA
ACTCATGACT TATCAACCGC GAGATATTTT TGCGACAGGA TTGCTGTTAT GTATCTTGGA
AGAATAGTTG AGTTAGGCGA TGCTGACGAA ATAATTGAAA GACCTCTACA TCCATACACC
AAAGCTTTGA TAGAAGCAGT ACCAGAACCT TTACCTGGAA AAGAAAACGT AATAAAAGAA
TTACCAATAA AAGGAGAGAT CCCATCTGCA GCAAATATAC CAAAAGGATG TAGATTCCAT
CCAAGGTGTA TTTATGCACA GCCTGAATGT TTTGAGAATG TGGATGATCC AGAGTTGGTA
GAAGATTCAA ACGGTCACTA CGTTGCCTGT TACAGGTACA AAGAGATAGA TCAGGAAGTA
GAAAAGGTTT GA
 
Protein sequence
MNDEIIMTVK NLKKWFPLRR TISEIFQGKR RWVRAVDNVS FDIRKGEIFG LIGESGCGKS 
TTGRLLMKLE EPTEGQIIFK GEDVTFLSST EEIKKYKEDV QMIFQDPYSS MNPRFRVRDV
LAEPLIIHNK TKDPNEIEEI AKNVLNEVKL TPPEEFMDRY PHMLSGGQRQ RVATARTLVL
SPDFIIADEP VSMIDLSTRA EILHMMKDVQ QDLGLTYLYI THDLSTARYF CDRIAVMYLG
RIVELGDADE IIERPLHPYT KALIEAVPEP LPGKENVIKE LPIKGEIPSA ANIPKGCRFH
PRCIYAQPEC FENVDDPELV EDSNGHYVAC YRYKEIDQEV EKV