| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1332 |
|---|
| Symbol | |
|---|
| ID | 5757585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1428639 |
|---|
| End bp | 1429610 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641302525 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001568359 |
|---|
| Protein GI | 160902778 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.656006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGA TTTTAAATGT TAAAAATTTA AAAGTGTATT ATTATACAAG AAAAGGTGTT
GTAAAAGGAT TGGACGATGT GAGTTTTTCC CTGAGAGAAG GGGAAACCTT AGGGCTTGTT
GGAGAGTCTG GATGTGGTAA AACAACGTTG GGCATGGGTC TTTTGAGAAT GCCAAGTCCT
CCAGGCAAAA TCGTAAGTGG AGAGATTAAT ATAGATGGTG AAAATATAGT CCCTTTAAAA
GAATCTGTTT TACGTAAGAG AGTCAGATGG GAAAAGATTT CCATGGTTTT TCAGGGAGCT
ATGAATAGTT TGACGCCAGT TTACACCATT AAAAAACAGA TGATGGAAAC GCTTCAAACT
CATAGGGAAA TGGAAGAAGA AAAGGCTATG GCTATAATTA AAAAATATTT AAATCAAGTG
GGGTTATCAG AGGATATTTT GAAGAGATAC CCTCACGAAT TATCGGGAGG GATGAAACAA
CGTATTGTAA TCGCCACAGC GTTGTTTTTA GAGCCCAAAG TGATTATTGC CGATGAACCT
ACTACAGCCT TAGATGTTGT CGTTCAAGCT CAAATAATAA ATCTTCTGAA AAGGTTAAAA
AAGGATCTTA ATTTGTCTTT TATCTTTATA ACCCATGATT TAGCTACCGA GGCAGAAGTA
GCAGACAGGA TAATGGTGAT GTATGCAGGT AAGATAGCTG AAATAGGAGA GAATCATCAT
ATTTATGGCC CTCAGGGACC GGCACATCCA TATACAAAAG GTTTGCTGGG AGCTACACCT
CTTTTACATA AAAAAGTTGA AGAACTAGCT TTTATACCAG GTGTACCACC TGATTTACTC
AATCCACCCA GTGGCTGTCG ATTCCATGAG CGTTGTCCGG TTGCTTTCGA TAGATGCAAA
GTAGAAGAAC CACCTTTGAA GGAAATTGAA CCCGGTCATT TTGCAGCTTG TTGGAGGTGT
TTTGATGAAT GA
|
|---|
| Protein sequence | MNEILNVKNL KVYYYTRKGV VKGLDDVSFS LREGETLGLV GESGCGKTTL GMGLLRMPSP
PGKIVSGEIN IDGENIVPLK ESVLRKRVRW EKISMVFQGA MNSLTPVYTI KKQMMETLQT
HREMEEEKAM AIIKKYLNQV GLSEDILKRY PHELSGGMKQ RIVIATALFL EPKVIIADEP
TTALDVVVQA QIINLLKRLK KDLNLSFIFI THDLATEAEV ADRIMVMYAG KIAEIGENHH
IYGPQGPAHP YTKGLLGATP LLHKKVEELA FIPGVPPDLL NPPSGCRFHE RCPVAFDRCK
VEEPPLKEIE PGHFAACWRC FDE
|
|---|
| |