Gene Pmob_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1239 
Symbol 
ID5756614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1324817 
End bp1326754 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content37% 
IMG OID641302443 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001568278 
Protein GI160902697 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGT TTTACGTCAC TACACCGATT TACTACGTTA ACAGTGAACC ACATATTGGT 
TCAGCGTATA CGACGATAGT TGCGGATATA GTAGCGAGAT TTAAGAGAAT GATGGGGTAC
GATGTTTTCT TTTTGACTGG AACGGATGAA CATGGGCAAA AGGTGTTACA GGCAGCAAAA
GAGAAGAATA TACCTCCACA GGAGTATGTT GATTCGCTTT CTTCAAAATT TAAAAATTTA
TGGGATGAAA TGGGGATTAG TTACGATCAT TTTGTTAGAA CAACAGATGC TTATCATGTA
AAGACCGTGC AGATGTTTGT TGATAAGATG ATGGAGAATG GAGACGTTTA CAAAGGAAAG
TACGCCGGTT GGTATTGCAT ACACGATGAA TCCTTTTGGG ATGAATCTGA GATAGTCACG
CAAGATGGCG TTAAGCTTTG CCCTGAATGT AATAGAGAAT TGAAATGGGT AGAGGAAGAG
AATTACTTTT TTAAACTTTC CAAATATACC GAACCATTGT TGAAGCATTA TGAAAATAAT
CCGGACTTTG TGGAACCATC TTTTAGAAGA AATGAGATGT TGCAAATTTT GAATGATGGG
TTAAAAGATC TCAGCATCAC TAGGACTACC TTCGATTGGG GAATACCTTT AAAGAGTGAT
CCAAAACATG TGGTGTATGT TTGGGTGGAT GCGTTAATTA ATTATGTAAG TGCGATAGGC
TATTCTGACG ATCAACAGAA ATTCAACAGG TACTGGCCTG CAGATTTACA CCTTATTGGA
AAAGAAATAA ATAGGTTCCA TTCGCTAATT TGGCCCGCTA TGTTGATGTC AGTGGGGTTG
CCTTTGCCGA AGAAGGTATT CGCACATGGG TGGCTAACGG TCAATGGACA AAAGATTTCA
AAATCTTTGG GGAACGCCGT TGATCCAAGG ATTCTGATGG ACGCATATGG TAGAGATGTT
ATAAGGTATT ATTTGTTGAG AGATATCGCC TTTGGTAGGG ATGGAGATTT TTCGGAAGAA
AACTTAATTA CTAGGTACAA CGCTGATTTG GTCAATGATT TAAGTAATTT AGTGCATAGA
ACACTCACGA TGGTTGAAAA GTATTTTAAT GGTGTCATAC CAAAACCTGA AAGAAAAGAC
AAGGTGGATG AAGAACTCTT AGAACTCCTA GAGAGTAAGA AAAACGCTTA TTTGAATTTG
ATGGAGCGGT ATCAGTTTAC ACAAGCCCTT GAAAATCTAT GGGAAGTCAT ACGTTTTTCT
AATAAATACA TCGATTTAAC TGAGCCTTGG ATCTTGGGGA ACGATCCAAA TGAAAAAGAT
AGATTGTCCA CCGTTTTGTA CAATCTGCTC GACGTTATTC GAATTATTTC TATTTTGATT
TATCCAATTA TGCCAGATAC TTCTGAAACG ATGTTAAAAA AGATAGGTTA TGGTTTGGAA
ATTTTAAATC GAGAGAACCT TGAAAAGGGC CTTTTACACA GTGGAGTTAA AGTTGTGAAA
GGTGATCCTA TATTCCAAAG AATCGATGTG AAGAGTTGGA AAAGAATAAT TAAAACGGTA
AATATCAACA AGGAGGACGA AGTAATGCCA GAAAATGAAA ACGTTCAAAA TATAGTAGAA
ATAGAGGATT TTAAAAAGAT AGATTTAAGA GTTGCCAAAG TGGTAAAGGC AGAAAATATC
GAAAAGTCTA ACAAACTACT GCGATTACAT CTTGATTTAG GGCAGATGGG TGAAAGGCAA
GTGATCGCAG GCATCAAGAG CTTTTATTCA CCTGAAGATT TAGTTGATAA GAAGATAATA
ATCATTGCTA ATCTAAAACC CGCCAAATTG ATGGGGGAAT TATCCGAAGG TATGCTTTTA
GCCGCTAAAG ATGGAAACGG TAATTTGAGT GTACTGACGG TAGATAAAGA TGTTGAACCT
GGTTCAAAGA TTTCTTAA
 
Protein sequence
MDKFYVTTPI YYVNSEPHIG SAYTTIVADI VARFKRMMGY DVFFLTGTDE HGQKVLQAAK 
EKNIPPQEYV DSLSSKFKNL WDEMGISYDH FVRTTDAYHV KTVQMFVDKM MENGDVYKGK
YAGWYCIHDE SFWDESEIVT QDGVKLCPEC NRELKWVEEE NYFFKLSKYT EPLLKHYENN
PDFVEPSFRR NEMLQILNDG LKDLSITRTT FDWGIPLKSD PKHVVYVWVD ALINYVSAIG
YSDDQQKFNR YWPADLHLIG KEINRFHSLI WPAMLMSVGL PLPKKVFAHG WLTVNGQKIS
KSLGNAVDPR ILMDAYGRDV IRYYLLRDIA FGRDGDFSEE NLITRYNADL VNDLSNLVHR
TLTMVEKYFN GVIPKPERKD KVDEELLELL ESKKNAYLNL MERYQFTQAL ENLWEVIRFS
NKYIDLTEPW ILGNDPNEKD RLSTVLYNLL DVIRIISILI YPIMPDTSET MLKKIGYGLE
ILNRENLEKG LLHSGVKVVK GDPIFQRIDV KSWKRIIKTV NINKEDEVMP ENENVQNIVE
IEDFKKIDLR VAKVVKAENI EKSNKLLRLH LDLGQMGERQ VIAGIKSFYS PEDLVDKKII
IIANLKPAKL MGELSEGMLL AAKDGNGNLS VLTVDKDVEP GSKIS