Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1239 |
Symbol | |
ID | 5756614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1324817 |
End bp | 1326754 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641302443 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_001568278 |
Protein GI | 160902697 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAGT TTTACGTCAC TACACCGATT TACTACGTTA ACAGTGAACC ACATATTGGT TCAGCGTATA CGACGATAGT TGCGGATATA GTAGCGAGAT TTAAGAGAAT GATGGGGTAC GATGTTTTCT TTTTGACTGG AACGGATGAA CATGGGCAAA AGGTGTTACA GGCAGCAAAA GAGAAGAATA TACCTCCACA GGAGTATGTT GATTCGCTTT CTTCAAAATT TAAAAATTTA TGGGATGAAA TGGGGATTAG TTACGATCAT TTTGTTAGAA CAACAGATGC TTATCATGTA AAGACCGTGC AGATGTTTGT TGATAAGATG ATGGAGAATG GAGACGTTTA CAAAGGAAAG TACGCCGGTT GGTATTGCAT ACACGATGAA TCCTTTTGGG ATGAATCTGA GATAGTCACG CAAGATGGCG TTAAGCTTTG CCCTGAATGT AATAGAGAAT TGAAATGGGT AGAGGAAGAG AATTACTTTT TTAAACTTTC CAAATATACC GAACCATTGT TGAAGCATTA TGAAAATAAT CCGGACTTTG TGGAACCATC TTTTAGAAGA AATGAGATGT TGCAAATTTT GAATGATGGG TTAAAAGATC TCAGCATCAC TAGGACTACC TTCGATTGGG GAATACCTTT AAAGAGTGAT CCAAAACATG TGGTGTATGT TTGGGTGGAT GCGTTAATTA ATTATGTAAG TGCGATAGGC TATTCTGACG ATCAACAGAA ATTCAACAGG TACTGGCCTG CAGATTTACA CCTTATTGGA AAAGAAATAA ATAGGTTCCA TTCGCTAATT TGGCCCGCTA TGTTGATGTC AGTGGGGTTG CCTTTGCCGA AGAAGGTATT CGCACATGGG TGGCTAACGG TCAATGGACA AAAGATTTCA AAATCTTTGG GGAACGCCGT TGATCCAAGG ATTCTGATGG ACGCATATGG TAGAGATGTT ATAAGGTATT ATTTGTTGAG AGATATCGCC TTTGGTAGGG ATGGAGATTT TTCGGAAGAA AACTTAATTA CTAGGTACAA CGCTGATTTG GTCAATGATT TAAGTAATTT AGTGCATAGA ACACTCACGA TGGTTGAAAA GTATTTTAAT GGTGTCATAC CAAAACCTGA AAGAAAAGAC AAGGTGGATG AAGAACTCTT AGAACTCCTA GAGAGTAAGA AAAACGCTTA TTTGAATTTG ATGGAGCGGT ATCAGTTTAC ACAAGCCCTT GAAAATCTAT GGGAAGTCAT ACGTTTTTCT AATAAATACA TCGATTTAAC TGAGCCTTGG ATCTTGGGGA ACGATCCAAA TGAAAAAGAT AGATTGTCCA CCGTTTTGTA CAATCTGCTC GACGTTATTC GAATTATTTC TATTTTGATT TATCCAATTA TGCCAGATAC TTCTGAAACG ATGTTAAAAA AGATAGGTTA TGGTTTGGAA ATTTTAAATC GAGAGAACCT TGAAAAGGGC CTTTTACACA GTGGAGTTAA AGTTGTGAAA GGTGATCCTA TATTCCAAAG AATCGATGTG AAGAGTTGGA AAAGAATAAT TAAAACGGTA AATATCAACA AGGAGGACGA AGTAATGCCA GAAAATGAAA ACGTTCAAAA TATAGTAGAA ATAGAGGATT TTAAAAAGAT AGATTTAAGA GTTGCCAAAG TGGTAAAGGC AGAAAATATC GAAAAGTCTA ACAAACTACT GCGATTACAT CTTGATTTAG GGCAGATGGG TGAAAGGCAA GTGATCGCAG GCATCAAGAG CTTTTATTCA CCTGAAGATT TAGTTGATAA GAAGATAATA ATCATTGCTA ATCTAAAACC CGCCAAATTG ATGGGGGAAT TATCCGAAGG TATGCTTTTA GCCGCTAAAG ATGGAAACGG TAATTTGAGT GTACTGACGG TAGATAAAGA TGTTGAACCT GGTTCAAAGA TTTCTTAA
|
Protein sequence | MDKFYVTTPI YYVNSEPHIG SAYTTIVADI VARFKRMMGY DVFFLTGTDE HGQKVLQAAK EKNIPPQEYV DSLSSKFKNL WDEMGISYDH FVRTTDAYHV KTVQMFVDKM MENGDVYKGK YAGWYCIHDE SFWDESEIVT QDGVKLCPEC NRELKWVEEE NYFFKLSKYT EPLLKHYENN PDFVEPSFRR NEMLQILNDG LKDLSITRTT FDWGIPLKSD PKHVVYVWVD ALINYVSAIG YSDDQQKFNR YWPADLHLIG KEINRFHSLI WPAMLMSVGL PLPKKVFAHG WLTVNGQKIS KSLGNAVDPR ILMDAYGRDV IRYYLLRDIA FGRDGDFSEE NLITRYNADL VNDLSNLVHR TLTMVEKYFN GVIPKPERKD KVDEELLELL ESKKNAYLNL MERYQFTQAL ENLWEVIRFS NKYIDLTEPW ILGNDPNEKD RLSTVLYNLL DVIRIISILI YPIMPDTSET MLKKIGYGLE ILNRENLEKG LLHSGVKVVK GDPIFQRIDV KSWKRIIKTV NINKEDEVMP ENENVQNIVE IEDFKKIDLR VAKVVKAENI EKSNKLLRLH LDLGQMGERQ VIAGIKSFYS PEDLVDKKII IIANLKPAKL MGELSEGMLL AAKDGNGNLS VLTVDKDVEP GSKIS
|
| |