Gene Pmob_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1224 
Symbol 
ID5757043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1307714 
End bp1308592 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content35% 
IMG OID641302428 
Productdihydrodipicolinate synthase 
Protein accessionYP_001568263 
Protein GI160902682 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAG GTCTTGGAAC AGCTATGATC ACACCTTTTG ATAAAGAATT GAACGTCGAT 
TATAATTCAT TAAAAACTTT CGTTAAATAT CAGCTTGACA ACGGTGTTGA CAGTTTAATA
GTTTTAGGAA CTACTGGAGA AGCACCTGCT ATTGAAGAAG AAGAAAGAGA AAAAATAGTC
AACACGGTAG TAGAAATTGT CAATAAGAAA ATTCCCGTTA TTGTGGGAAC GGGAACAAAC
AACGTGAATC ATGTTTTGAA AAACAATAAA GTAGCTGAAA GTGCTGGTGC AGATGGTTTA
TTAATCGTTA CCCCTTATTA CAATAAAAGT ACGCAAAAAG GATTGGTAGA GTATTTTAAG
TACATCTCTG AAAGAACAAC TTTACCAATA ATAATGTACA ACGTACCTTC AAGAACCGGC
ATGAATATAC TCCCAGAAAC AGTCGTTTCT ATCCACGAAA ACTGTAAAAA CGTTATTGGA
GTGAAAGAAG CTAGCGGTAA TATATCTCAA ATAGGAGAAT TATTTTCTAT AAAACCGGAT
TCTCTTAAGG TGTTTTCAGG AAACGACGAT CAAGTCCTTC CTATAATGAG TTTAGGCGGA
GATGGACTTA TTTCAGTTAC GTCCAACGTT GCCCCACGAC CTTTCGTTGA ATTAACCCAT
AGCATTCTTA ACAACGATTT AGAAAAGGCT AGAAAATTAA ATAATCAATT TATGAAACTC
AACAAACTTT TATTCAAAGA GGTTAATCCC ATTCCTGTCA AATATGCCGT TTCTTTGTTA
GGTTTATGTG AAAATGTCGT GAGATTACCA TTGGTGAAAG CAAGTCAAGA AACAGAGAAA
CTTCTAAAAG AAGAGATGGA AAGGTTGGAT CTAGCATGA
 
Protein sequence
MFKGLGTAMI TPFDKELNVD YNSLKTFVKY QLDNGVDSLI VLGTTGEAPA IEEEEREKIV 
NTVVEIVNKK IPVIVGTGTN NVNHVLKNNK VAESAGADGL LIVTPYYNKS TQKGLVEYFK
YISERTTLPI IMYNVPSRTG MNILPETVVS IHENCKNVIG VKEASGNISQ IGELFSIKPD
SLKVFSGNDD QVLPIMSLGG DGLISVTSNV APRPFVELTH SILNNDLEKA RKLNNQFMKL
NKLLFKEVNP IPVKYAVSLL GLCENVVRLP LVKASQETEK LLKEEMERLD LA