Gene Pmob_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1222 
Symbol 
ID5757092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1306364 
End bp1307065 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content37% 
IMG OID641302426 
Producttetrahydrodipicolinate succinyltransferase domain-containing protein 
Protein accessionYP_001568261 
Protein GI160902680 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
[TIGR03532] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG AAGAAATAAT AAATTTAATA GCAAACTCAA AGAAAAAGAA TCCTTTGAAG 
GTCTACCTTA AAGGTAACCT CAAAGAAGTA GATTTTTCCA ATGTAGAATT TTATGGTAAC
GATGAATTCG GAATCTTGTT TTGCGAAGAA GAAGATTTCA AAACAATTTA TGAGACTTAT
AAAGATTCTA TAATTAATTA CAGAATAGAA AGGGATAGAA AAAATTCTGC CATTCCTTTG
GCAGATTTAT CTAAATACAA TGCGAGAATA GAACCAGGTG CCATAATAAG GGATCTTGTG
GAGATAGGCG ACGGTTGTGT TATTATGATG GGTGCCGTTA TCAATATAGG AGCCTGCATT
AAGGAAAACA CCATGATAGA TATGAACGTC GTTATAGGAG GGAGGGCTCA AATAGGGAAA
AATTGCCATA TTGGTGCAGG AGCAGTTATA GCAGGGGTCA TAGAACCTCC CAGCGCTCAA
CCAGTGGTGA TTGAGAATAA TGTTCTTATT GGAGCTAACG CAGTGGTATT AGAAGGAGTG
AAAGTAGGTC AGGGATCAAT AATCGGAGCC GGTTCTGTGG TAATTTCTGA TGTCGAACCA
TACTCTGTGG TAGCAGGAGT CCCTGCAAAA TTCATTAAAA AGGTTGACGA TAAAACAAAA
GCCAAAACTC AACTTGTAGA AGGACTTAGA AAGTTGAAAT AA
 
Protein sequence
MNTEEIINLI ANSKKKNPLK VYLKGNLKEV DFSNVEFYGN DEFGILFCEE EDFKTIYETY 
KDSIINYRIE RDRKNSAIPL ADLSKYNARI EPGAIIRDLV EIGDGCVIMM GAVINIGACI
KENTMIDMNV VIGGRAQIGK NCHIGAGAVI AGVIEPPSAQ PVVIENNVLI GANAVVLEGV
KVGQGSIIGA GSVVISDVEP YSVVAGVPAK FIKKVDDKTK AKTQLVEGLR KLK