Gene Pmob_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1172 
Symbol 
ID5756578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1257432 
End bp1257920 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content31% 
IMG OID641302378 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001568213 
Protein GI160902632 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.78155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA TTGGGTTTGG TTACGATGTT CATCCTTTTG CTGAAAATAG AAGATTAATA 
TTGGGTGGAG TTGTAATTAA TCATCCAAAA GGTTATGGAT TATTGGGCCA TTCGGATGGA
GACGTTTTTT TTCATGCATT AATTGATAGT TTATTAGGGA TGTGCGGTTT GGGGTCAATA
GGGGAGTACT TTCCTGAAAG TAAAGAGTTT GAAAATATTA GTAGCTCAAT CCTATTAGAA
AAGACTATAG ATTTGATTAA TAAAAGATAT ATTGTTAAGA TAAATAATAT AGATGTGGTG
ATCATATCTA AGAGTGTAAA TATCAGTTCA ATAACAGGTC AAATCAAAAA TAATACCTCG
TGTATCTTAA ATTTAGAAGT AAGTCGAATA AACTTAAAAG GGAAAAGTGG TAATGGTCTG
GGGGTTGGAG GAAATGACCA AGGTATAGAA GTTTATTGTA CCATTTTAGG TGAGATAGAT
GAAATATAA
 
Protein sequence
MLKIGFGYDV HPFAENRRLI LGGVVINHPK GYGLLGHSDG DVFFHALIDS LLGMCGLGSI 
GEYFPESKEF ENISSSILLE KTIDLINKRY IVKINNIDVV IISKSVNISS ITGQIKNNTS
CILNLEVSRI NLKGKSGNGL GVGGNDQGIE VYCTILGEID EI