| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1119 |
|---|
| Symbol | |
|---|
| ID | 5757006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1200792 |
|---|
| End bp | 1201832 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641302326 |
|---|
| Product | peptidase M42 family protein |
|---|
| Protein accession | YP_001568161 |
|---|
| Protein GI | 160902580 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTT CTACTTTACT AAAAAATTTA TCCAATACTT TTGGGGTGTC TTCTTTTGAA
AATTACACCT TTCCTTTGAT TGAAGAAGAA TTAAAAAACA TCTCACCAGA TATAAAATTA
GAAAAAGTAG GAATAGGTAA TTTAGTGGCA ACTTATGGAA ATGAGAGTCC CAAAATTGCC
TTTTTCGCAC ATGTAGACGA AATTGGAATA GTTATATCAA AAATAATCGA TGAACACTTC
GCTCGTATTT CTCCCGTTGG TGGAGTCGAT CCAAGAACCT TGGTAGGAAA AAGGGTTCTT
TTTAAAACGA AAGATGCAGA AAAAATAGGT GTAATAGGGT TTTTAGCCCC TCACCTTCAA
AAAAAGGAAG ATAGAGAAAA ATCTCCCTCC TTTGATGAGC TTTTCGTCGA TTTTTCAATT
TCAGGGGGAA CAAGCAATAT CAACGTTGGT GATATGGGCG TTATACAAGT CCAGGCTGTT
GAACTTGAAA ATGGAAAGAT ATCAAATAAA TCTTTAGACA ACAGAGTAGG TGCTGCGGTA
CTAATTAAGT CTTTGGAGTA CCTACAAAAT CTTAAATTTG AAGGACAATT GACTTTGTCT
TTTAACAAAG GTGAGGAAGT GGGATTAGTT GGAGCACAAG GTAGCGCTCA CCACCGAAAA
CCAGATTTTG CCATAGTAGT TGATGTAACT TTTGGCGAAA AACTACCAGA AAACTTTGAG
CCTATCAAGC TTGGTGAAGG ACCAGTTATA GGTATAGGTA CCACCGTTAC CAGAAGTATT
TTCGAAGAAC TAACAAAAAC TGCAAAAAGT AACAATATCA AATACCAATT AGAAACTTTT
ACTAGAGGCA GTGGCACCGA AGCGGATGTA GTTCAAATAT CTTCTACCGG AGTAAAAACA
GGTGTTGTTT CAGTTCCAAT CCTTAACATG CATTCTCCCA ACGAGGTTGT AGATGTAAAA
GATGTGGAAG AAAGCGCAAA ATTATTATCT TTCTTTGCTT TAAACACCAG CTTAACTTGG
AAAGGAAGTA GAAATTTATG A
|
|---|
| Protein sequence | MDTSTLLKNL SNTFGVSSFE NYTFPLIEEE LKNISPDIKL EKVGIGNLVA TYGNESPKIA
FFAHVDEIGI VISKIIDEHF ARISPVGGVD PRTLVGKRVL FKTKDAEKIG VIGFLAPHLQ
KKEDREKSPS FDELFVDFSI SGGTSNINVG DMGVIQVQAV ELENGKISNK SLDNRVGAAV
LIKSLEYLQN LKFEGQLTLS FNKGEEVGLV GAQGSAHHRK PDFAIVVDVT FGEKLPENFE
PIKLGEGPVI GIGTTVTRSI FEELTKTAKS NNIKYQLETF TRGSGTEADV VQISSTGVKT
GVVSVPILNM HSPNEVVDVK DVEESAKLLS FFALNTSLTW KGSRNL
|
|---|
| |