| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1101 |
|---|
| Symbol | |
|---|
| ID | 5757244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1177998 |
|---|
| End bp | 1181195 |
|---|
| Gene Length | 3198 bp |
|---|
| Protein Length | 1065 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641302308 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001568143 |
|---|
| Protein GI | 160902562 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTAA AAAAAGTTGA TGTTTACAAA GAGATAGATG ATCCAAACAG GAATTTCTTC
ATTTCGGCAT CAGCTGGAAC GGGCAAAACT TATATTCTTA CACAATATTT TATAAAAGTG
TTAGAAAAGA ATTTTCCCAA TGCTGACATA GTTGATAACA TTCTTACGGT GACCTTTACA
AATAAAGCTG CCTCCGAAAT GAAGAATAGA ATTATGGAAG AGGTTTCCAA TAAATTGGAT
AAAAAACCCC CATATGGCGC CAGCAAATTA GAATGGTATC AATATTGGAA CGAAGTAAAA
ATTAATTTAT CACGCTCCTG GATCAAAACT ATAGACAGCT TTTGTTCAAG AATAATAAGG
GAAAACAACA TTTCAGTGGG AGTAGACCCA AATTTTAGTA TAATAAGCGA TTTTCAAAGA
GATCGAGAAG TTGAAAGATC GGTTTATTCT GCTCTAAGAG TCGCCTTAGA AATATATCAA
GACAAGGAAA TAGATTGGCT CAACTTCTTA TCCACAAAAA GGAAAGAAAA AATAGAAAAG
TATGTCGAAG CTTTAAATGA AGAAAAAACA AAATTTAAAG AAACCTTTAA AACTATACTT
TCTGAAATAG GACTGGACAA GTTTGAAAAA ATAATTCAAG ATATTGTTTC CAACTGGCGC
ATCGAAATGT CAAGAGCTTT ATTAACTAAT GATTTAGAAT TAGCAGATAA AGAACTTTCC
GAACTTTACA AGAACTTTTT ATGGCTTGTC AAAATTATTT CTCTCATCGC TAGTGAATTC
TATTTGGGAT TAACCATCGA TAATTTTTTA TACGATTTCA AAGCGGTTTT AGAAAAGGTT
GTAGAAGAAT TCGAAAATAA CCCTGACCTT CTTAAAAAGT ACCAAAACAA ATTTAAATAC
ATCATAGTTG ATGAATTTCA AGATACCAAT TATCTTCAAA AAGAAATCTT TGACAAACTC
CATACCACAG ATAATTACTT TTTTTACGTT GGAGATAGGA AACAATCCAT CTATCGTTTC
AGAGGAGCGG ATGTGTCTGT GTTTTCTCGT TCTTTAACAG AAGCTGAAAA CTCTGATGAA
GAAGTTCTTT TGGGAAAATT AACTAAAAAC AGAAGGTCCC ACCAACAAAT AATAAATTTT
GCAAATCATC TTTCTGAAAC TTCTTTATTT AAAAGAGATA ATTTACAGAT GCCAGATATC
GATCCCAAAC TTTTAGAAAA TCTTTCCTTC CAAGAAGAAG ATATATCAGA ACCCGAAATT
CCTCCCCAAG AGACCGAAAC AATTCCTACA TTGAGTGAAG ACGATACTAA AAGAGTTAAA
TACATATTAA TTGAACCTAC AGAGGAAAAT GGTTTAAACA ACCAAGAAAA TCGCCTTGCT
ATTGAAATTG ACACGTTGGC AAAAGTGATA AAAAAGTTGT TAGGACAAGA AATGGATTTC
AAGGTAAGAA AAAATAATAA AGTATATTAC GAAAGAAGAA AAATAGAACC AAAAGATATC
GCTGTCCTTT CAAAAGAATT AAAAAATACA GAGAAAATAC TTAGAAACAC TTTTTTTAAA
TATAATATAC CCTTTTATAT ATTCGGCAGC AAATCTTTTT ACAATAGACC AGAAATTCAA
GCTATTTTCG CTGCCCTCAA CTCAATTCAA AATCCATTCA ACGACTACCA GTTTGTCAGA
TATATGATGT CACTTCTAGT AGGTATGAGT TTTCAAGATC TTTCCAAATT AGTAGAAAAA
AGTCAGGGAA GTTTTTTTGA AACGTTTGAA AACATAAAAA ATGAATTCCC TGAAGATGTA
GTAGAAAGTT ATAAAGTGCT TAAAAAGTAC AAGGATCTCA AATATTATTT AACTCCTTCT
TCTATACTGA AAGGTATAAT AAACGATAAC AATTACTTCT CTAAACTCGC TTTAACAAAC
GATCCTGAAG TTTCAATATC CAATATAAAA AAACTTATAA ATCAAGCTGA AGAATACAAC
AATATGGCAA ATTCCTTTTC TGAATTGGTG AGATTTTTGA AAAATGCCTC TAATATTTCT
GAAGAAGAAG CTTCTATTGA AGATGAAACA TCTAACAGTG TAAAAGTAAT GACCATCCAT
AAATCTAAAG GTTTGGAATT TCCTATTGTA TTAATGATTG GTTTACACAA CTCTATCTCA
AACACAAAAA ATGGTTCTAA TGCAGAATTT TCAATCCCTA ATGCGGAGGG AAATAGATAT
TACATCTTAA ACAATATATA TAAAGAGAGC GTAGAAAACA GTGATCACTG GCTTCTCAAA
TGGTTTAAAA ACAACGAATT TTTGGATAAA ACCGAAGCCA ATAGATTAGT ATATGTGGGA
ATAACAAGAG CGAAAGACTT GTTGCTACCC ATTTTAGTGT CCAACGAGAA AGCTGATACT
TTAAATAATT TCTTCTTAAC TGTAAAAAAT TCAGATATGA TAGATATAAT TCAATCTGAT
CATATTCAGC AAGTACAAGA AAACACCCCT GAACCTCTGA ACCAAGAGGG AGAAAATTCT
TTGTTTAAAG ATATACCACA ACAAAATCTT AAAGACTTAA CCAATCTCTC GTATAAAAAG
TATATAGCCC CAACTTACAT AATCAAGGAA ATAAAAACTG AAGAATTAGA TTTAATCGAA
GACCTCAGTG GAACCATTAC ATCTCCTTCA ACTTATTTTG ATCCAAAAAA CATTTTTTCA
GACCAAGAGC TTATCTTCAG AGGGTCTTTT TTACACTCTA AACTAAGAAG TGCTCAAAAC
ATAAGTCACA TAAAAAACAT GATAAAAAAT GGCGAGTTAC CACAGCGTTT TGATGAATTA
GATATAGTGA AAAAAGCTTT CACACCCAAT GAGAATAAAA TAATAAAAAA TGAATGGAGA
CTCATGAAAA AATTGAATTT AGGAAAAAAA GAATACATGT TATTTGGGAT TCCTGATAAA
GTCATCATAG AAAACGGTGA TATCGAGATT TTGGATTACA AATACTCAGA ATTGAGAGAT
CCAAAAAAAA TCAACGATTA TCAATTTCAA ATTTTATTCT ATCTTTATCT ATTATCCGAC
TTTGGGAATC CAAAAAGTGG TCACATAATA AGTATCAAAA CATTACAAGA TCCCATAACT
TTTGAATACG ATCCCAAGTT TGAAGAGAGA TTGATCTCAC AACTTTTGAA AGAGGGAAAT
TATTATGAAT TCAGCTAA
|
|---|
| Protein sequence | MTVKKVDVYK EIDDPNRNFF ISASAGTGKT YILTQYFIKV LEKNFPNADI VDNILTVTFT
NKAASEMKNR IMEEVSNKLD KKPPYGASKL EWYQYWNEVK INLSRSWIKT IDSFCSRIIR
ENNISVGVDP NFSIISDFQR DREVERSVYS ALRVALEIYQ DKEIDWLNFL STKRKEKIEK
YVEALNEEKT KFKETFKTIL SEIGLDKFEK IIQDIVSNWR IEMSRALLTN DLELADKELS
ELYKNFLWLV KIISLIASEF YLGLTIDNFL YDFKAVLEKV VEEFENNPDL LKKYQNKFKY
IIVDEFQDTN YLQKEIFDKL HTTDNYFFYV GDRKQSIYRF RGADVSVFSR SLTEAENSDE
EVLLGKLTKN RRSHQQIINF ANHLSETSLF KRDNLQMPDI DPKLLENLSF QEEDISEPEI
PPQETETIPT LSEDDTKRVK YILIEPTEEN GLNNQENRLA IEIDTLAKVI KKLLGQEMDF
KVRKNNKVYY ERRKIEPKDI AVLSKELKNT EKILRNTFFK YNIPFYIFGS KSFYNRPEIQ
AIFAALNSIQ NPFNDYQFVR YMMSLLVGMS FQDLSKLVEK SQGSFFETFE NIKNEFPEDV
VESYKVLKKY KDLKYYLTPS SILKGIINDN NYFSKLALTN DPEVSISNIK KLINQAEEYN
NMANSFSELV RFLKNASNIS EEEASIEDET SNSVKVMTIH KSKGLEFPIV LMIGLHNSIS
NTKNGSNAEF SIPNAEGNRY YILNNIYKES VENSDHWLLK WFKNNEFLDK TEANRLVYVG
ITRAKDLLLP ILVSNEKADT LNNFFLTVKN SDMIDIIQSD HIQQVQENTP EPLNQEGENS
LFKDIPQQNL KDLTNLSYKK YIAPTYIIKE IKTEELDLIE DLSGTITSPS TYFDPKNIFS
DQELIFRGSF LHSKLRSAQN ISHIKNMIKN GELPQRFDEL DIVKKAFTPN ENKIIKNEWR
LMKKLNLGKK EYMLFGIPDK VIIENGDIEI LDYKYSELRD PKKINDYQFQ ILFYLYLLSD
FGNPKSGHII SIKTLQDPIT FEYDPKFEER LISQLLKEGN YYEFS
|
|---|
| |