| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1020 |
|---|
| Symbol | |
|---|
| ID | 5756585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1086953 |
|---|
| End bp | 1087657 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641302228 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_001568064 |
|---|
| Protein GI | 160902483 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATCTA TCAACAACAT AAGAATAATA CCTGCAATAG ACTTAATGAA TAAAAAAGCG
GTAAGACTCT ATAAAGGGAG TAAAAACGAA ATAAAAGAAT ACGGAGATCC CATAGAAATA
GCCAAAGAAT TTTCAAAATA TGTCGACCTA ATTCATATTG TTGACTTAGA CGGTGCTTTT
GAAGGATCTG TAAAAAACTT AGATGTCGTA AAACAAATAA TCCAAAAAAC CGGGTTGAAA
GTTGAACTGG GTGGAGGATT AAGAACTTTT GAGAGCATAA AAGATGCATA CGAAATAGGT
GTTACTTATG TGATCATAGG TACAGCAGCC TTTAACTTAG AATTCTTAGA AAAAGTTACC
AGTGCTTTCA ACAATATAAC CATAAGTATG GATGTTGAGA ACGGAACTTT AAAAACAAAA
GGTTGGTTAG AAAACTCACA AATTACCTTA GAAGATGCTT TTTCTATTTT TAAAAAATAC
ACCAACAGAT TCATATATAC AGACACAAAT AAAGACGGAA CTTTAGAAGG TGTTTCTTTA
AACATAAAAA GATTCTGGCA AGATGAAGAA ATAATATACG CCGGGGGTGT AAGTAAAAAA
GAAGATTTAA AAAAATTGGA AAATATAGGT TTCGATGGGG CTATAATAGG AAAAGCTCTT
TACGAAGGTA AAATCAATTT GCAGGAGTTA AGGGGTGAAC AATAA
|
|---|
| Protein sequence | MKSINNIRII PAIDLMNKKA VRLYKGSKNE IKEYGDPIEI AKEFSKYVDL IHIVDLDGAF
EGSVKNLDVV KQIIQKTGLK VELGGGLRTF ESIKDAYEIG VTYVIIGTAA FNLEFLEKVT
SAFNNITISM DVENGTLKTK GWLENSQITL EDAFSIFKKY TNRFIYTDTN KDGTLEGVSL
NIKRFWQDEE IIYAGGVSKK EDLKKLENIG FDGAIIGKAL YEGKINLQEL RGEQ
|
|---|
| |