Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0996 |
Symbol | |
ID | 5758169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1061833 |
End bp | 1063839 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641302205 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_001568041 |
Protein GI | 160902460 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACATAC CAAAAAACAT AAAAGAACGA TACGAAAAGT TAAAAGCAGA AATAGAAGAA CATAACTACC GATACTACGT ATTGGCTGAT CCTATTATCT CGGATCAGGA ATACGATAAA CTTTTTAAAG AACTAGTGGA GCTCGAAAAA AAATATCCCG AATTGAAAAC CCCTGATTCT CCAACTCAAA GAATCGGTGG TATAGTTGTT GAGGGATTCA ATAAAGTAAA TCATTTGATA CCGATGTTAT CTTTAGATAA CACCTACAAC GAAGAAGAAA TTTTAGATTT TCACAAAAGA GTTTTAAAGA ACTTGAGTTT AAACCATGTT GAGTACTTTT GTGAACTAAA GATAGATGGA GTATCGGTAG CTTTAAGGTA CACCGATGGA GTATTAACTC AAGCTATAAC CAGAGGCGAT GGAACAACCG GAGAAGATAT CACGCAAAAC GTAAAAACGA TCCCCTCTAT TCCTTTAAGA TTGAGGGAAA ATCTAACTAT TGAAGTACGT GGAGAAATAT ACATGCCAAA AAAAGAATTT GTGAGAATAA ATTCAGAAAG GGAAGAAAAA GGGTTACCTG TTTTCGCTAA TCCTAGAAAC GCAACAGCGG GCACTTTAAA ACTTTTGGAT AGTACAGAAG TGGCAAAAAG AAAGTTAAGC TCTTTCATGT ATTACGTTAT CTTCCCTCAA AATTACAACT TAGAAACTCA AGAAGAAGCG ATAAATTTTC TGAAAGAAGT TGGTTTCAGA ATCAATCCTA ATTACAAAAA TGCCCAAGAT ATCGGACAAG TTATAGAATT TTGGAAAGAA TGGAATCGAA GGAGAAAGGA ATTAGAATAC GAAGTAGATG GGATAGTAGT TAAGGTGAAC AGTTTTGAAC TGCAAAGACT CCTTGGTGAA ACCGCCCGAT CCCCACGATG GGCAATTGCT TTCAAATTTG AAGCCGAACA GAAAGAAACG AAACTAAAAG CTATAAAACT GCAAGTTGGG AGTACAGGGA TAATAACTCC TGTTGCAGAA TTTGACCCCA TACAACTTGA AGGAACAATA GTAAAAAGGG CAAGTTTGCA CAACTTTGAT TATCTAAAAG AAAGAGATAT AAGGGAAGGC GATTATGTAT TAATTGAAAA AGCAGGTGGC ATAATTCCCC AAGTTATAGG GCCCGTTAAA GAAAAAAGAA CTGGGGAAGA AAAAATAATC CGACCCCCTG AAAAATGCCC TGTCTGTGGT GGAAAAGTTG GAAAAATAAA GTCATCAGAA GTGGCAATAA GATGTTTGAA TCCCTCTTGC CCAGAAAAGC TTTTAAGAAC GTTGGAAAAT TTCGTTTCAA GAAACGCAAT GAATATTCAA GGGCTTGGGC CAAAGATATT AAAAAGAATG GTAGATGCAG GTTTACTTAA AGATATAGCC GATCTTTATT ATTTAAACGA ACAAAAAATT AGAAGCTTGG GAGAAGGTAT AGGAGACAAA ACAGTAGAAA ATATATTGAC ACAAATAGAG CAATCCAAAA ATAGAGAACT GGATAGATTA ATTAACGCTC TTGGTATACC AAATGTTGGT TCAAAAACTG CGAAAGACCT TGCAAATCAT TTTAAAAATT TAGACAGTTT AATAGATGCA AAATTCGATG AACTTGTAGA AATAGAGGGA ATTGGTGAAG ATATAGCAAA TGCAATTATA AAGTTTTTTT CACAGGAAGA AGTTAAAAAG ATCGTTAAGA AATTAAAAGA TGCAGGAGTC AACATGGGGA AAAAAGAAGA AGAAAAATTA GAAGGACCTC TAAAAGGTTT AGTTATATGT CAAACCGGTG CTCTTTCTAA AATGACAAGA CAAGAATTCG CCGAATACGT TGAATCTAAA GGTGGAACCT TCTCTGAAAA CGTGACGAAG AAAACGAATA TCCTAGTCGT TGGAGAAAAC CCTGGTTCTA AACTAGATAA AGCTCAAAGT TATGGAATTA CTATAATGAG TGAAGAAGAG TTCTTTGATA AATATGGAGA AAGTTAG
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Protein sequence | MDIPKNIKER YEKLKAEIEE HNYRYYVLAD PIISDQEYDK LFKELVELEK KYPELKTPDS PTQRIGGIVV EGFNKVNHLI PMLSLDNTYN EEEILDFHKR VLKNLSLNHV EYFCELKIDG VSVALRYTDG VLTQAITRGD GTTGEDITQN VKTIPSIPLR LRENLTIEVR GEIYMPKKEF VRINSEREEK GLPVFANPRN ATAGTLKLLD STEVAKRKLS SFMYYVIFPQ NYNLETQEEA INFLKEVGFR INPNYKNAQD IGQVIEFWKE WNRRRKELEY EVDGIVVKVN SFELQRLLGE TARSPRWAIA FKFEAEQKET KLKAIKLQVG STGIITPVAE FDPIQLEGTI VKRASLHNFD YLKERDIREG DYVLIEKAGG IIPQVIGPVK EKRTGEEKII RPPEKCPVCG GKVGKIKSSE VAIRCLNPSC PEKLLRTLEN FVSRNAMNIQ GLGPKILKRM VDAGLLKDIA DLYYLNEQKI RSLGEGIGDK TVENILTQIE QSKNRELDRL INALGIPNVG SKTAKDLANH FKNLDSLIDA KFDELVEIEG IGEDIANAII KFFSQEEVKK IVKKLKDAGV NMGKKEEEKL EGPLKGLVIC QTGALSKMTR QEFAEYVESK GGTFSENVTK KTNILVVGEN PGSKLDKAQS YGITIMSEEE FFDKYGES
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