Gene Pmob_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0996 
Symbol 
ID5758169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1061833 
End bp1063839 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content35% 
IMG OID641302205 
ProductDNA ligase, NAD-dependent 
Protein accessionYP_001568041 
Protein GI160902460 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID[TIGR00575] DNA ligase, NAD-dependent
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACATAC CAAAAAACAT AAAAGAACGA TACGAAAAGT TAAAAGCAGA AATAGAAGAA 
CATAACTACC GATACTACGT ATTGGCTGAT CCTATTATCT CGGATCAGGA ATACGATAAA
CTTTTTAAAG AACTAGTGGA GCTCGAAAAA AAATATCCCG AATTGAAAAC CCCTGATTCT
CCAACTCAAA GAATCGGTGG TATAGTTGTT GAGGGATTCA ATAAAGTAAA TCATTTGATA
CCGATGTTAT CTTTAGATAA CACCTACAAC GAAGAAGAAA TTTTAGATTT TCACAAAAGA
GTTTTAAAGA ACTTGAGTTT AAACCATGTT GAGTACTTTT GTGAACTAAA GATAGATGGA
GTATCGGTAG CTTTAAGGTA CACCGATGGA GTATTAACTC AAGCTATAAC CAGAGGCGAT
GGAACAACCG GAGAAGATAT CACGCAAAAC GTAAAAACGA TCCCCTCTAT TCCTTTAAGA
TTGAGGGAAA ATCTAACTAT TGAAGTACGT GGAGAAATAT ACATGCCAAA AAAAGAATTT
GTGAGAATAA ATTCAGAAAG GGAAGAAAAA GGGTTACCTG TTTTCGCTAA TCCTAGAAAC
GCAACAGCGG GCACTTTAAA ACTTTTGGAT AGTACAGAAG TGGCAAAAAG AAAGTTAAGC
TCTTTCATGT ATTACGTTAT CTTCCCTCAA AATTACAACT TAGAAACTCA AGAAGAAGCG
ATAAATTTTC TGAAAGAAGT TGGTTTCAGA ATCAATCCTA ATTACAAAAA TGCCCAAGAT
ATCGGACAAG TTATAGAATT TTGGAAAGAA TGGAATCGAA GGAGAAAGGA ATTAGAATAC
GAAGTAGATG GGATAGTAGT TAAGGTGAAC AGTTTTGAAC TGCAAAGACT CCTTGGTGAA
ACCGCCCGAT CCCCACGATG GGCAATTGCT TTCAAATTTG AAGCCGAACA GAAAGAAACG
AAACTAAAAG CTATAAAACT GCAAGTTGGG AGTACAGGGA TAATAACTCC TGTTGCAGAA
TTTGACCCCA TACAACTTGA AGGAACAATA GTAAAAAGGG CAAGTTTGCA CAACTTTGAT
TATCTAAAAG AAAGAGATAT AAGGGAAGGC GATTATGTAT TAATTGAAAA AGCAGGTGGC
ATAATTCCCC AAGTTATAGG GCCCGTTAAA GAAAAAAGAA CTGGGGAAGA AAAAATAATC
CGACCCCCTG AAAAATGCCC TGTCTGTGGT GGAAAAGTTG GAAAAATAAA GTCATCAGAA
GTGGCAATAA GATGTTTGAA TCCCTCTTGC CCAGAAAAGC TTTTAAGAAC GTTGGAAAAT
TTCGTTTCAA GAAACGCAAT GAATATTCAA GGGCTTGGGC CAAAGATATT AAAAAGAATG
GTAGATGCAG GTTTACTTAA AGATATAGCC GATCTTTATT ATTTAAACGA ACAAAAAATT
AGAAGCTTGG GAGAAGGTAT AGGAGACAAA ACAGTAGAAA ATATATTGAC ACAAATAGAG
CAATCCAAAA ATAGAGAACT GGATAGATTA ATTAACGCTC TTGGTATACC AAATGTTGGT
TCAAAAACTG CGAAAGACCT TGCAAATCAT TTTAAAAATT TAGACAGTTT AATAGATGCA
AAATTCGATG AACTTGTAGA AATAGAGGGA ATTGGTGAAG ATATAGCAAA TGCAATTATA
AAGTTTTTTT CACAGGAAGA AGTTAAAAAG ATCGTTAAGA AATTAAAAGA TGCAGGAGTC
AACATGGGGA AAAAAGAAGA AGAAAAATTA GAAGGACCTC TAAAAGGTTT AGTTATATGT
CAAACCGGTG CTCTTTCTAA AATGACAAGA CAAGAATTCG CCGAATACGT TGAATCTAAA
GGTGGAACCT TCTCTGAAAA CGTGACGAAG AAAACGAATA TCCTAGTCGT TGGAGAAAAC
CCTGGTTCTA AACTAGATAA AGCTCAAAGT TATGGAATTA CTATAATGAG TGAAGAAGAG
TTCTTTGATA AATATGGAGA AAGTTAG
 
Protein sequence
MDIPKNIKER YEKLKAEIEE HNYRYYVLAD PIISDQEYDK LFKELVELEK KYPELKTPDS 
PTQRIGGIVV EGFNKVNHLI PMLSLDNTYN EEEILDFHKR VLKNLSLNHV EYFCELKIDG
VSVALRYTDG VLTQAITRGD GTTGEDITQN VKTIPSIPLR LRENLTIEVR GEIYMPKKEF
VRINSEREEK GLPVFANPRN ATAGTLKLLD STEVAKRKLS SFMYYVIFPQ NYNLETQEEA
INFLKEVGFR INPNYKNAQD IGQVIEFWKE WNRRRKELEY EVDGIVVKVN SFELQRLLGE
TARSPRWAIA FKFEAEQKET KLKAIKLQVG STGIITPVAE FDPIQLEGTI VKRASLHNFD
YLKERDIREG DYVLIEKAGG IIPQVIGPVK EKRTGEEKII RPPEKCPVCG GKVGKIKSSE
VAIRCLNPSC PEKLLRTLEN FVSRNAMNIQ GLGPKILKRM VDAGLLKDIA DLYYLNEQKI
RSLGEGIGDK TVENILTQIE QSKNRELDRL INALGIPNVG SKTAKDLANH FKNLDSLIDA
KFDELVEIEG IGEDIANAII KFFSQEEVKK IVKKLKDAGV NMGKKEEEKL EGPLKGLVIC
QTGALSKMTR QEFAEYVESK GGTFSENVTK KTNILVVGEN PGSKLDKAQS YGITIMSEEE
FFDKYGES