Gene Pmob_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0960 
Symbol 
ID5758173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1019349 
End bp1020515 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content34% 
IMG OID641302168 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001568005 
Protein GI160902424 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACA AGATGAAGGT TCCTCTTTTT GATTTAACAC GACAATACGA AAAATTGAGA 
AAAAATGTTC TAAAAAAGTT GGATGCTGTT TTCACTTCTG GAAATGTGGT TATGGGAAGT
AATGTAAAAG CCTTAGAAGA GGAAATTGCA AAGTATATAA ACGTAAAGTA CGCTATTGGT
GTTGCCAATG GCTCTGATGC CTTAAGGATA TCCGTTCAAG CTATAGGTAT AAAAGAAGGA
GATTACGTTA TCACCACACC ATATACTTTT TTTGCAACCG CAAGTGCAAT TTTACTGAAT
GGTGCCACGC CTATATTTGT GGATGTAGAA GATAAATATT ACAACCTTGA TTTGGATAAA
GTCGAAGATT TGCTTGAGAA TCATCCAAAA AAAGAAAAAA TTAAAGCAAT CATTCCCGTA
CACCTTTTTG GAAAAACCGT TGATTTAGAG AGATTGGAAA GAATAAGAGA GAATTACAAC
ATAAAAATTA TAGAAGACGC CGCTCAGTCT ATTGGATCTG TATGGCACTT TAAGAATGGT
GAAAGAAAAT TTAGTGGCAG CATCGGAGAT TTGGGCATAT TTTCCTTCTT CCCAACAAAA
AATCTAGGTG GTTATGGTGA TGGTGGAATG GTTGTTACAA ACAATGCGGA TTTGGCAGAT
AGGATCAGAA AATTAAGAGT TCATGGTGCT GCAAAAAAAT ATTATCACGA TGAAGTTGGT
TACAATTCAA GATTAGACGA AGTTCAAGCT GCAATATTGA GAATAAAACT AAACAATTTA
GATGAATACA TTGATAAAAG AATAAAAAAG GCAAAAAATT ATGAAGAATT ATTTGAATTA
CATAACCTCA ACGAAGATTT AAGTTATCCT GCTTATTTTA ACGACAGAAC CCATGTCTAT
CACCAATACG TAGTCACTTT GAATAACCCC AAAGATAGGG ATAAATTGAA AAAATTCTTA
GAAAATAAAG GGGTTGGAAC ATCGATATAC TATCCTCTTG GTTTGCACCT TCAAAAGTGC
TTTGAGAACC TGGGTTATAA AGAAGGGGAC TTCCCTGTAG CTGAAAATGC ATCTAAATCG
ACGTTAGCCT TGCCAATGTT TCCAGAGCTC ACCAAAAAGG AGCTGGAATA CGTAGTTAAA
AGTATTAAAG AGTTTTTTTC AAAATAG
 
Protein sequence
MEDKMKVPLF DLTRQYEKLR KNVLKKLDAV FTSGNVVMGS NVKALEEEIA KYINVKYAIG 
VANGSDALRI SVQAIGIKEG DYVITTPYTF FATASAILLN GATPIFVDVE DKYYNLDLDK
VEDLLENHPK KEKIKAIIPV HLFGKTVDLE RLERIRENYN IKIIEDAAQS IGSVWHFKNG
ERKFSGSIGD LGIFSFFPTK NLGGYGDGGM VVTNNADLAD RIRKLRVHGA AKKYYHDEVG
YNSRLDEVQA AILRIKLNNL DEYIDKRIKK AKNYEELFEL HNLNEDLSYP AYFNDRTHVY
HQYVVTLNNP KDRDKLKKFL ENKGVGTSIY YPLGLHLQKC FENLGYKEGD FPVAENASKS
TLALPMFPEL TKKELEYVVK SIKEFFSK