| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0952 |
|---|
| Symbol | |
|---|
| ID | 5757728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1009942 |
|---|
| End bp | 1010967 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641302160 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001567997 |
|---|
| Protein GI | 160902416 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCAA AGAGAAACAA AAATTCTCGA ATAACTATTG AAGATATAGC ACAGATCGCA
CAAGTCTCTA AAGCTACTGT TTCTTATGTG ATCAACGATA AACCTGGTGT AAGTGAACCA
GTTAGAAATA AAATAAAAAA TATAATTGAG GAAACTAATT ATTTCCCTAA TTCTGCAGCA
AGAGGTTTAG CAGGTGAAAA AACAAATTTT GTTGGTTTAG TTATCCCTGA TATTTCTGAT
ATGTTTTATG CAAATATTAT TAGAGGAGTA GAAAAAACTT TAAATAAAAA AGAATATCTT
CTCAATCTAT TTACCACACA CGCAAGACCA GAAAGAGAGC AACAAGTAGT TCGACTGTTG
AATAAAAGTA TGGTTGACGG ATTAATTATA ATGGCTTATT TTATTACTGA TAATTTCATA
CAATCTTTGA AAGAAAGAGA GATCCCTTTT GTCTTCATCG ATTACCCACC AAAAGATGAA
GATATTTATT CCGTAATGGT TGACAACGAA AATGGTGCTT TTGAGGCGAC AGAATATTTG
ATAAAACTTG GGCATAAAAA AATAGCGTTT TTAGAAGGTC CAGAAGTTGC GTGGGATTCA
AAGGCACGAT TCAAAGGTTA TTTAAAGGCA TTAGAAACTC ATGGGATCAA ATTCAACCCA
GAATTGGTTG AAAATGGTAA TTTTACAAAA GAGGAGGGAT ATACCGCTAC AAAAAGGTTG
TTAGAAAAAG GAGAAAAATT CACAGCTGTC TTTTCTTCGA ACGATCAAAT GGCTATAGGG
GCAATAAGGG CTTTAAAAGA AAGTGGGTAC AAAATTCCAA CAGATGTCTC TATTGTGGGT
TTTGATAACA TCGAGGCAAG TTCTATAATA GAACCCCCTC TAACAACTGT TTCACAGCCT
ATATATGAAA TGGGTAAAAA GGCTGTAGAT ATAATAACAG CTTTGATAAA TGGAGAAACA
ATAGAAGAAA AAAGATATAT GTTAAAAACA AAATTAATTG AAAGACATTC TTGTACAAAA
ATATAA
|
|---|
| Protein sequence | MPPKRNKNSR ITIEDIAQIA QVSKATVSYV INDKPGVSEP VRNKIKNIIE ETNYFPNSAA
RGLAGEKTNF VGLVIPDISD MFYANIIRGV EKTLNKKEYL LNLFTTHARP EREQQVVRLL
NKSMVDGLII MAYFITDNFI QSLKEREIPF VFIDYPPKDE DIYSVMVDNE NGAFEATEYL
IKLGHKKIAF LEGPEVAWDS KARFKGYLKA LETHGIKFNP ELVENGNFTK EEGYTATKRL
LEKGEKFTAV FSSNDQMAIG AIRALKESGY KIPTDVSIVG FDNIEASSII EPPLTTVSQP
IYEMGKKAVD IITALINGET IEEKRYMLKT KLIERHSCTK I
|
|---|
| |