| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0946 |
|---|
| Symbol | |
|---|
| ID | 5757545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1001683 |
|---|
| End bp | 1004928 |
|---|
| Gene Length | 3246 bp |
|---|
| Protein Length | 1081 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641302154 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001567991 |
|---|
| Protein GI | 160902410 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.975146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGG TCTATTTATT TGACTTAAAT CCTGAACATT TTAAAAACGT TGGAGATCTT
ATACTTCCTT TTTACAACGA AGACCCTCTG AACTTTTTGT TTCTAGGGCC TTCTGGTTTT
TATGTGAAGC AAGTGGCAGA ATATATTGCA TCACAAACAA AAAAAACTAT AAATCGTGAT
GCCTTCAGGG TTATAAACCA ATATGTAACT GAGACGCTAA AAACATACCA ACCACAATCT
GTAATACTGA ACAGGGATTT TTTGAAGGTA TACATCGAAA ATGAGATAAT GGATTTAATA
GAAGCAGAGA AAAAAGACGA AGAATTTTCT GAATATCTAA ACGTTATATC CAAATCTCAA
AAATCAGTAG AGTACATATT AGATATTTTC GAGAAAAAAT GGGAAATTTC AAGGGTTGAA
GATGAAAAAA TCGTTGAATC CTCTGAAGAA TACAAGTTGC TTGATGATTC TATAGATAAC
AATTCTAATT TGTACATGCT TTACACAAAA TTAGAAAAAA AACTCGAAGA TATTTTAGAA
ACGAAGTTCG ATATGTCTAT TAAATATCAA AGAAATTACG ATCCCGTCAG TGTGTACAAA
TGGTTTTATG AGATTTTACC AACTAGATTG AAAGAAGAGG GGAAAAAATA TATAGGAAAA
AGGGTCGTTA TTTCGGGTTT TTTTGATATT TCTCCAGCCG TTAACAAAAC ACTTAAAGCT
TTATTTGATC TATTTGAAGA GGTTCATTTT ATTACTTGGG TCAACATAGA AGACAGAAGT
TTTGATTCAA TAACTAACAT ACACAACTTT TTAAAAAATG AAGGGTTTGA GTTCCAATCG
AAAAGGAAAG GCTTAAAACG GATTTTTGAA AATACTAATA TTGAAATCTT TCCCATGAAC
AACGATGTTT CTGAAATAGA AACACTTACA AAAGAAATAA AAAGAAGATT GATAAGTGAA
AATCTTTCAC CCGATGATTT GGGGGTCGTT GTTCCCAATA ATTCTACTGC AAAATTATTG
GCGGATTATT TGGAAGATGC CAAGGTACCT TACAGGTTCA AAAACGATGT TCCGCTAAAC
GAAAGCCAAA TAGTTTTGAT TCTTCTTCAA CCGATTAAAA CACTGGTCAG AGGTTGCGAA
GTTGAAGATA TTTTGGCGAT GATTGAAAGT GGTTACGGAG GAGTAACTGA GCTGACAATG
GAGCAGATAG AAAATTATCT AAAGCATTTA AACTTATTCT ACGACATACA AAAATCCTCA
CTCAAAAACC GAAAAGAAAA ATGGATGAAT ACCGTTGAGA AAGAAATAGA TAAAAGAAGT
TCTCAACTTA AAGGTACAGA AGAAATAGAA AGAATAAGTG AAGAACTCAA AGACTTAAGG
GAATTAAAAA AATGTCTTGG AAACATATTT TCTCTTTTAG AAGATATCCA AAAAAGCAAA
GATCGAAAAA GGTACTTCAG TGTTTCTGAT TACAGAGAGT TGGTGAAAGA ATGGATAAAT
ACTTACCTAT CTCATTTCAA CATACTGAAA ACATACGAGG ATGTACTCCC CGTTGAGAGT
CAATTAAATG CATTAAAAGC CTTCGAAACT TTAGTATTCA ACGTCGAAGA AAATTTGGAA
AAAATTCTAA AGTCAGATAA AAATTTAGGA ATTGAAAAAT TCTACAAAAT ACTTTCTTCT
CTAATTCAGA TTGAAACATA TAGAGAATCT GAAAGGTACG ATAATACGGT AGAAATAATG
AGCCTTGAAG ACTCAAGATT TGTAAAGAAA AAATACAAAT ATTTTGTTGG TTTCACCGAA
GAAAACTATC CTTCAATAAA GGTCAATCCT TTCATCACTT CTATGAGTAA CGAAGGGACC
TCAATCGCCA GACATTCAGA AAAGATTAGT AGAAGAAACT TGTTTATCTC CATGATTTTC
GCTGATAATA TTATATTTAC ATATCCAAAC GCTAAACTAA GTGGAGAACC AATACTACCC
TCTCCATACG AAAAAGAGTT TAGGAACAAC TTTAAAAACG TTAAATATTC CAGTGAGTTT
CTCTCTAAAA AAGAGATCCT ACCAAAAGAT CCGGAAAATA TATTCTCTGA ATCAGAAGCT
ACTATTTATT ACATATTGAA CGGGAAGAAA GAATATTTAC AAAGTAAACA CTGCACTGAT
ATTGAGAGAT TAAAAAAAGA GATAACTAAT CCAAGTTGGC AATTGTATAA AAATACCGAT
CTTGGACGGT TAAGCCATAC AAAAATTACT ACTTATGTGG ATTGCCCGTT TAAGTATTAC
CTAGGTATAG AAGGTCGATT AAATGGAGAT AAAGATTTTG GGAAGTTTTT CGATGGACTT
ATAAAGCACA GGGTGATGAA AGAGATATTT TCCAAATACA AAAATTATGA AGTTATGTCC
CAAAAAATTC TCAACAAAGA AGAATTGAAA GAAGAAATAA AAAAAATCAT TGAAGATATT
TGGGAGGAGT ATACAGACGA TTTTTTACAA ACCTATCAAG CTATAAAAGA TGTGGAAAGT
GAAATAATAA CAGAAGATAT TTTAGAAACC ATAGAAGACA TACATCGAAA TTATATCCAT
TTCAAAAAAG GTATAGATCT GACATATTCT CAAGTTATAG CTACAGAGTT GGAGGTAAAT
TCAAAGATAA ATATCGGAAA TTTTCATGAT GTAGACTTAA CATCGAGAAT AGACAGGGTA
GATCTTTTAA ACGGTAACTA CGCATACCTT CTTGATGAAT TCGACGAACA ACTATTGCCA
GGAACGTACT CAATTATGGA TTACAAAAGA TCAAAAAATT TCCAAAGTGA ACAATTGCTA
ATTTATTACC TAACCTTATT AAATAGCGAA GAATGGAAAA ACAAATTAAC AAATTCTGAT
GTATATCTAA AATTTCAAGT AGTATCAAAG AAAAAAGAGC ATAAAAATGA TAATTTTATA
AAAATACAGA AAGGCCAGAT TATATATAAA GAGCACAAGT CTAAAGCAAA ATACGTATCT
TTTGATATTA AAGAATTCTA CACATGGTTA GAGAAAGTTT TTCAAAACAT CAACAAATCT
GATTTCACTC CTATAGCAGT AAAAGAAAGA GAAATAAGAA GGTTTTTAGA AGAAATGTAT
GATAAATACA ACAACGCAAA AACAGGGGAA AAATATTACG ACTGCTCTTC TTGCCAATTC
AGAAGTTTAT GCGAGTTGAT ACAGTACAAA AAAGATTTTA ATATTAACAT AAAAAAATAC
CTTTGA
|
|---|
| Protein sequence | MKKVYLFDLN PEHFKNVGDL ILPFYNEDPL NFLFLGPSGF YVKQVAEYIA SQTKKTINRD
AFRVINQYVT ETLKTYQPQS VILNRDFLKV YIENEIMDLI EAEKKDEEFS EYLNVISKSQ
KSVEYILDIF EKKWEISRVE DEKIVESSEE YKLLDDSIDN NSNLYMLYTK LEKKLEDILE
TKFDMSIKYQ RNYDPVSVYK WFYEILPTRL KEEGKKYIGK RVVISGFFDI SPAVNKTLKA
LFDLFEEVHF ITWVNIEDRS FDSITNIHNF LKNEGFEFQS KRKGLKRIFE NTNIEIFPMN
NDVSEIETLT KEIKRRLISE NLSPDDLGVV VPNNSTAKLL ADYLEDAKVP YRFKNDVPLN
ESQIVLILLQ PIKTLVRGCE VEDILAMIES GYGGVTELTM EQIENYLKHL NLFYDIQKSS
LKNRKEKWMN TVEKEIDKRS SQLKGTEEIE RISEELKDLR ELKKCLGNIF SLLEDIQKSK
DRKRYFSVSD YRELVKEWIN TYLSHFNILK TYEDVLPVES QLNALKAFET LVFNVEENLE
KILKSDKNLG IEKFYKILSS LIQIETYRES ERYDNTVEIM SLEDSRFVKK KYKYFVGFTE
ENYPSIKVNP FITSMSNEGT SIARHSEKIS RRNLFISMIF ADNIIFTYPN AKLSGEPILP
SPYEKEFRNN FKNVKYSSEF LSKKEILPKD PENIFSESEA TIYYILNGKK EYLQSKHCTD
IERLKKEITN PSWQLYKNTD LGRLSHTKIT TYVDCPFKYY LGIEGRLNGD KDFGKFFDGL
IKHRVMKEIF SKYKNYEVMS QKILNKEELK EEIKKIIEDI WEEYTDDFLQ TYQAIKDVES
EIITEDILET IEDIHRNYIH FKKGIDLTYS QVIATELEVN SKINIGNFHD VDLTSRIDRV
DLLNGNYAYL LDEFDEQLLP GTYSIMDYKR SKNFQSEQLL IYYLTLLNSE EWKNKLTNSD
VYLKFQVVSK KKEHKNDNFI KIQKGQIIYK EHKSKAKYVS FDIKEFYTWL EKVFQNINKS
DFTPIAVKER EIRRFLEEMY DKYNNAKTGE KYYDCSSCQF RSLCELIQYK KDFNINIKKY
L
|
|---|
| |