Gene Pmob_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0885 
Symbol 
ID5758229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp940473 
End bp942311 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content38% 
IMG OID641302094 
Productputative oxidoreductase 
Protein accessionYP_001567931 
Protein GI160902350 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATACTC CTGAAAAAAG TTTTTTTGCT CCAGCAAGAG CTTGGAAATA CCTTACTAAA 
AAGCCTGTTA CCGTTCCTAT GGAAAATATT CTAATAACAC CTCGAGAGGC TTCAGATAGA
TATAGAGGTT TTCATATAAA CGACTGGGAA AAATGTATCG GTTGCGGTAC TTGTTCAAAA
ATATGCCCAA CAGATGCTAT AACTATGATA GAGATCGAAG AACTTTCGGA TGTGGAAGGC
TCTAAACCCC AAAGGCCTTC TATAGATTAT GGAAGATGCA GCTTTTGTGG TTTGTGTGTG
GATATATGTA CCACTGGTTC ATTGCAGATG ACCAAAGAAT ATTTACATAT ATCTAAAGAT
CCGAACACCT TCTTTTTTAT ACCCACAGAG GAAGGAATCC ATGGAATTAG AAAACCATTA
GGTTATGTTA GAGATGAAAA TTCAGACCTA CTTGACTTAG AAAGAGAAGA GATGGAAATT
GATCCACCAG AAATCAGAAA AACATCATTC ATAGAGATGG TTAAAGGATT TTCAAAAGAA
CAGGCTGTTA AAGAGGCTTC AAGATGTGTA GGGTGTAGTA TTTGTGAAAA GACATGTCCA
GCCCATATGA ACATTGCAGA CTACATAACG GATATATACA CGGATGATCT TCAAACAGGA
TTGAAAGATC TTTATAAAAC GAATCCTTTG CCTGCTGTAT GTGGGAGAAT GTGTACTCAC
AAATGTGAGA CAGTTTGTAC CATAGGTCAC AGAGGAGAAC CTATAGCCAT AAGATGGTTG
AAAAGATATA TAGTGGATAA CGTCCCACAG GATAAATACC CAGAAATTTT AGATCAGGAA
GTTATAAAAA AGGCTAACGC TAAGGTTGCC ATCGTTGGAG CCGGACCTGC CGGACTTTCT
GCAGCTTATT TCTTATCTTT AATGGGATAT GAAATCACTG TTTATGAAGA AAAGAATAGG
CCTGGTGGTG TTCTTAATTA CGGAGGCCCT TCTTATAGGC TTCCAGACAC AGCTTTTGAG
CAAGATGTAA ATTACATAAA GTCACTGGGA GTAAAGATAA TAACGAATAC AAAAGTTGGA
AAGGATATCA CTTTAGAAGA ATTAAAAGCA AAAAACGATG TAATATTTGT TTCAACTGGA
TTCAACAAGG GTAGAAAGCT TCCCATTGAA GGATCTGACC ATGAAAATGT CTTTGACTCT
TTAACAATTT TAGAAGAAAT GAAAAATTAT GTCAGAGGAG AAGGCCCAAA ACCATATATA
CCTAAATCCC TTGTGGTAAT AGGAGGAGGA AATGTTGCCA TGGACGTTGC AAGGTCCATG
CTTAGACTCC AAAACCTAGA ATATAAAAAA TCCGAAGTGC ATGTTCTGAG TTTAGAGAGA
AGCTTTGATG AAATGCCTGC TGATGAAGAC GAGATAGTTG AAGGTAAAGA AGAAGGGGTA
AATTTCCATC CAGGATGGGG TCCCGTGAAG GTGATAGTTG AAAATGGAGA AGTGAAAGGT
GTGTTATTTA GGAAATGTGT GGAAGTATTC GATGAGGACG GAAGATTCAA TCCAAAATAC
GATGAAAGTA ACACTATTAC GGTAAATGCA GATATGGTCG TAATGACTGT TGGGCAGGCT
CCAGATTACA GCTATCTGCC GGAAGAGATC CAAAAGAACA TGAAGATAGA AAGAGGAAAG
ATAAAAACAA ACGAGTACGG TCAAGTGGAA GGTGTACCAT GGCTATTTGC AGGTGGAGAT
ATAGTACATG GACCAGATGT AATTCACGGA GTTGCAGACG GACACAAAGC TGCTCAAGGA
ATAGACCAAT ACATTATGGA GAAAAAATTT TCAAAATAA
 
Protein sequence
MNTPEKSFFA PARAWKYLTK KPVTVPMENI LITPREASDR YRGFHINDWE KCIGCGTCSK 
ICPTDAITMI EIEELSDVEG SKPQRPSIDY GRCSFCGLCV DICTTGSLQM TKEYLHISKD
PNTFFFIPTE EGIHGIRKPL GYVRDENSDL LDLEREEMEI DPPEIRKTSF IEMVKGFSKE
QAVKEASRCV GCSICEKTCP AHMNIADYIT DIYTDDLQTG LKDLYKTNPL PAVCGRMCTH
KCETVCTIGH RGEPIAIRWL KRYIVDNVPQ DKYPEILDQE VIKKANAKVA IVGAGPAGLS
AAYFLSLMGY EITVYEEKNR PGGVLNYGGP SYRLPDTAFE QDVNYIKSLG VKIITNTKVG
KDITLEELKA KNDVIFVSTG FNKGRKLPIE GSDHENVFDS LTILEEMKNY VRGEGPKPYI
PKSLVVIGGG NVAMDVARSM LRLQNLEYKK SEVHVLSLER SFDEMPADED EIVEGKEEGV
NFHPGWGPVK VIVENGEVKG VLFRKCVEVF DEDGRFNPKY DESNTITVNA DMVVMTVGQA
PDYSYLPEEI QKNMKIERGK IKTNEYGQVE GVPWLFAGGD IVHGPDVIHG VADGHKAAQG
IDQYIMEKKF SK