Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0796 |
Symbol | |
ID | 5756858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 834916 |
End bp | 837036 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641302000 |
Product | UvrD/REP helicase |
Protein accession | YP_001567843 |
Protein GI | 160902262 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.573798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAA ACAAGGGGAA TGATTTCCTC TTTTTGGGAG AAAAAAACAC CCCGAAGGGG GTTCAAGGAA ACACCCCGAA CGAGGTTGAG GAGAACACCC CGAAGGGAGT TCAAGGAAAC ACACCGAACG GGGTCAAGGA AAAATTCCCC TCCTTAAGTG GCGGAAGCCC GTCATCTTTA TTCGAAAATG AGTTGGATGA AGAACAAAGA GAAGCTGTTA TAAAATCAGA AGGAAGATCG ATAATAGTTG CGGGTCCTGG CTCTGGTAAA ACTAGAGTAA TAACCTATAA AATTGCTTAT TTGTTGAATA ATGGAGTTGA ACCTGAAAAT ATTTTATTAG TCACCTTCAC CAGGGCTGCG GCAAGGGAAA TGATAGAAAG GGTAAAGAAT GTTACCAATA GAAATATAGA TAAAATGCTA GCTGGTACAT TCCATCATGT ATGTAATTCT ATTCTTAGAA AGTACGCCAC GCTTTTAGAC TATAAAAATA ATTACAGCAT CCTCGACAAA GAAGATTCAA AAGATTTGTT AAAAATGGCT AAAAGCGAGT ACATCAAAGA AATCAGTGAT AATTACAAGC TTCCAAAAGA AGAAGTAATA ATGAAAATTA TAAGCTATTC ATGTAACACA TTGACCTCTT TAAGAGAATC AATACTTGAA AGAGCCCCAT ATTTGTTGAA TTTTGAAAGA GATATTGAGC AAATATGGAG TATATATATC CAATTAAAAA AAGATATGAA TGCAATGGAC TATGATGATC TGTTAGTAAA TACTTTAGTT TTATTCAAAA CTCATCCAGA AGTACTAAAC AAGTGTTCAA GCCAATTTAA ATATGTTTTA GTTGACGAAT TTCAAGATAC CAACAAAATT CAAATAGAAT TGGTTGAGGC TTTATCATCG GTTCATGGGA ATCTGATAGT TGTTGGAGAC GATTCTCAAA GTATATATTC ATTCAGAGGA GCTTTATTTA AAAACGTAAA AGATTTTATA GAAGATGAAA GAACAAAGGT TTTCAAGATA CAAAGTAATT ACAGAAGTAC CTCTGATATA GTTGGTTTGA TTAATCACCT AATACCTTCT AATTCTGTTC CTAAAGTCCT TAAACCTAAG AGAAAAAGTT ATTTAAAACC TTTCGTTGTG GAAACTTTTG ACGATTTGGA ACAAGCAGAT GCCGTAGTCA AAATCATAGA AGATAAATTA AAAGAAGGTT TAGATTATAA AGATATCGCT GTGCTATATA GATCGCATTC GTTATCTATG GTGTTACAAC AAAAATTGGA TTCAAAAGGT ATCCCTTACA GAATACTATC AGGATTGAGA TTCATCGAAA CGGCACATAT AAAAGATATA TTGGCTTTTT TAAAGGTATT AAACAATCCT TTAGATAAGA TTTCGTGGAG TAGGATTTTA AAATTATTTC CTGGAATTGG TAACAAAACT GCATCTAAGA TCTATGAAGA GATTGAAACT GGAATAGGGA AAAGCCCCGA GCGGGGTCAA GGAGAAGAAA ACGATAACAT CTCAAATATA TTGAAGGAAA CTGAAATAAA TAAGTTCAAA ACACCCTTGG AATTATTAAC AAAACTTTTC GATAATAAAG AAAGTAGTCC TGATGAGTTG ATAGATACCA TTTATAAAGA TTTCTACCAA GAATATTCTT TCTTAACTTA TGCAGATTCT AAATCAAGGA ACATGGATAT TGAAAGATTC AGTGAAATTG CCAGTCGTTA TGATTCAGTA AGTGCTTTTA TAGAAGATTT GACGCTTAGT GAAGAGATAG GAGTAATACC TGCGAGTAGG GATAAAGATG AGAATAAGTT AACGCTCACA ACGATTCATG GGGCTAAGGG ATTGGAATGG AAAGTAGTTA TTCTCATATC GGTGAATCCA GGAGATTTTC CCAACGGACT TGCAATTAAA GAACAAAAAT TAGATGAAGA AGAAAGGCTC TTCTATGTTG CCATAACAAG AGCAAAGAAT GAATTATACA TTTTGAAACA GCTAACCGGT ACAACCAACC CGTATCTAAA AAATTCATTT TATTTTGTAA AAAAAGAAAA CGATTTTATC AAAAAAATTC CGGAGGAAAC GGTCAATCGT TTGAAAATCA AATATAAATA A
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Protein sequence | MAKNKGNDFL FLGEKNTPKG VQGNTPNEVE ENTPKGVQGN TPNGVKEKFP SLSGGSPSSL FENELDEEQR EAVIKSEGRS IIVAGPGSGK TRVITYKIAY LLNNGVEPEN ILLVTFTRAA AREMIERVKN VTNRNIDKML AGTFHHVCNS ILRKYATLLD YKNNYSILDK EDSKDLLKMA KSEYIKEISD NYKLPKEEVI MKIISYSCNT LTSLRESILE RAPYLLNFER DIEQIWSIYI QLKKDMNAMD YDDLLVNTLV LFKTHPEVLN KCSSQFKYVL VDEFQDTNKI QIELVEALSS VHGNLIVVGD DSQSIYSFRG ALFKNVKDFI EDERTKVFKI QSNYRSTSDI VGLINHLIPS NSVPKVLKPK RKSYLKPFVV ETFDDLEQAD AVVKIIEDKL KEGLDYKDIA VLYRSHSLSM VLQQKLDSKG IPYRILSGLR FIETAHIKDI LAFLKVLNNP LDKISWSRIL KLFPGIGNKT ASKIYEEIET GIGKSPERGQ GEENDNISNI LKETEINKFK TPLELLTKLF DNKESSPDEL IDTIYKDFYQ EYSFLTYADS KSRNMDIERF SEIASRYDSV SAFIEDLTLS EEIGVIPASR DKDENKLTLT TIHGAKGLEW KVVILISVNP GDFPNGLAIK EQKLDEEERL FYVAITRAKN ELYILKQLTG TTNPYLKNSF YFVKKENDFI KKIPEETVNR LKIKYK
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