Gene Pmob_0790 details

Gene Information

• Locus tag: Pmob_0790
• Symbol: rplC
• ID: 5756608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: -
• Start bp: 829410
• End bp: 830051
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641301994
• Product: 50S ribosomal protein L3
• Protein accession: YP_001567837
• Protein GI: 160902256
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGTA TTTTAGGTAA AAAAGTTGGA ATGACTCGTG TTTTTAAAGA TGATAAGGCC 
ATCCCGGTGA CAGTCATCAA AGCTGGACCT TGTGTGGTAG TTCAAAAGAA AACTGTAGAA 
ACAGATGGTT ATAACGCTAT ACAGATAGGT TTTGAAGAGA TACCAGAAAG AAAAGCAAAC 
AAGCCTTTGA TGGGTCATTT CAAAAAAGCG CAAGTAAAAC CTTTAAGGTA TTTAAGAGAA 
TTTAGAGTAG AGAATGTAGA TGATTACGAA ATCGGTCAAA AAATCGATGT AACAATTTTT 
TCTGAAGGAG AAAAGATTGA TTTAATAGGT AACTCAAAAG GAAGAGGATA CTCAGGAGTT 
ATGAAAAGAT GGAATTTTAG AGGTGGGGAA AACACTCACG GTTCAAAATT TCATAGAGGT 
TTAGGATCTA CAGGAATGGC AACATTCCCT TCAAAGGTAT TCAAAGGAAA GAAGATGCCA 
GGTCAATACG GAAATGAAAG AGTAACCATT CAAAACTCAG AGGTAGTTTA CATTGATGTA 
CAAAACAATC TAATAGCGGT CAAAGGTGGA GTTCCAGGAG CGAGGGGCGG ATTGGTAACG 
ATAAGAGAAG CCGTAAAGGC TAAACGCCCA AAAACGAAGT AG 

 

Protein sequence

MKGILGKKVG MTRVFKDDKA IPVTVIKAGP CVVVQKKTVE TDGYNAIQIG FEEIPERKAN 
KPLMGHFKKA QVKPLRYLRE FRVENVDDYE IGQKIDVTIF SEGEKIDLIG NSKGRGYSGV 
MKRWNFRGGE NTHGSKFHRG LGSTGMATFP SKVFKGKKMP GQYGNERVTI QNSEVVYIDV 
QNNLIAVKGG VPGARGGLVT IREAVKAKRP KTK