| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0762 |
|---|
| Symbol | |
|---|
| ID | 5758396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 814411 |
|---|
| End bp | 815472 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641301966 |
|---|
| Product | DNA-directed RNA polymerase subunit alpha |
|---|
| Protein accession | YP_001567809 |
|---|
| Protein GI | 160902228 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAT TAATTAAACC AGAAAAATTT AGGATAGTAC AAAAAGAAGA GCAAGATGAA
TATAACTACT CAAAATACGA ATTATTTCCT CTGGAAAAGG GGTACGCTAT AACTCTAGGT
AATGCTTTAA GGAGGGTGCT TTTGTCGTCC ATTCCATCTT TGGCTATAAC CGGGCTACGT
ATCCCAGGAA AATTACATGA ATACGACACA GTTGAGGGTA TAAAAGAAGA CATCATAGAA
ATAACTTTAA ACTTGAAAAA GGTTCAATTA AAGGTCGACG ACATTGAAAA AATTAATGAG
ATTGATTATC CAATTTTATT AAGTTTAAGA AAGAAGTACA AAGCAGGCCA AGTCATAAAA
AGTGGAGACA TAAAAACTCC GGCAGAATTA GAGGTTGCTA ACCCAGATTT CGTCATAGCC
CATGTGAACA AAGATATGGA AGTAGACTTT GAACTGTACG CTCAAGCAGG AAAAGGTTTC
ATCCCTGCCC AAGAATTGAC ATTTCAAAGT GACATCGAAT ACATATTCAT AGATGGAGTG
TTCAGCCCCG TTCTTAAAGT TAACTATTTA ACCGAAAATA TCCGTGTTGG AAGAAGAACC
GACTACGATA AACTAATACT TGAAATTTGG ACGAAAAAAA ACATCACCCC CACTGAAGCA
TTGAAAGAAG CAACAAAAAT TTTGATGGAA CATTTTGACT TCATTTCCAG ACTTTGGGAA
AGAGAAGGAC AAGTCGGCGC TATAGAACAA ACGGAAGTTT CGGTTGAAAA AGAAGAGGAA
GAGGAAGAAG AGGAAGAAAA TATTTTTGGA TTGCCAAAGG ATTTAATGGA AACGCAGCTT
GATTCTTTGG ATTTAACGAA AAGAGCCAAA AACTGTTTAA AAAGAGAAAA AATAGACACC
ATTGGAGAGC TATTAAAAAG AAAACCCGCC GACCTTCTCA AAATCAAAAA CTTTGGTAGA
AAATCTTTAG ATGAGATAAA AAATGAGCTA AAAGAGAAAT TTGATATAGA TTACGAAAAA
TTATACCAAG AAGAAAGGGG GAACACCTTC GATGAGGCAT AG
|
|---|
| Protein sequence | MEILIKPEKF RIVQKEEQDE YNYSKYELFP LEKGYAITLG NALRRVLLSS IPSLAITGLR
IPGKLHEYDT VEGIKEDIIE ITLNLKKVQL KVDDIEKINE IDYPILLSLR KKYKAGQVIK
SGDIKTPAEL EVANPDFVIA HVNKDMEVDF ELYAQAGKGF IPAQELTFQS DIEYIFIDGV
FSPVLKVNYL TENIRVGRRT DYDKLILEIW TKKNITPTEA LKEATKILME HFDFISRLWE
REGQVGAIEQ TEVSVEKEEE EEEEEENIFG LPKDLMETQL DSLDLTKRAK NCLKREKIDT
IGELLKRKPA DLLKIKNFGR KSLDEIKNEL KEKFDIDYEK LYQEERGNTF DEA
|
|---|
| |