| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0650 |
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| Symbol | |
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| ID | 5757254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | + |
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| Start bp | 700150 |
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| End bp | 701406 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641301858 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001567704 |
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| Protein GI | 160902123 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAACA AAAGAATAAG TGAGAAAGAA GAGAAAAAAA TTATGAAAAG CATAGAGAAT
ATCGATTTTG AAGATGCCGA AAAAGACGGA GATACCGTTA AAGTAAAAGT GAAAAAGTCC
CACGAAGAAG CAAAATCAGT AGATACTTTC ATTTCATTAT TAATAAATAA AGCAAAGAAC
AAAGGCAATA AATTATCTTA TTCCGATATT GATCATGCGA TCCCTACAGA TTTATCGGAA
GAAATTGACA GTGATTACAT AGAAAAGATT TACGAGGCTT TGGAAGCAGA AGGTATAGAA
ATTTTAGAAG AAGAAGTTGA AGAAGAAGAG AAAGATGCCT TAAATGAAAC GGAATATGAA
AATGAAGAGG TTGAAGAGTT ATTTTCGGAT ACAGAGCTTA AAATGTATGA CAATATTTCT
TTAGGTGATC CTATAAAAAT ATACCTCAAA GAAATAAGCA AAGTTGAGCT TTTAAGTCCT
TCCAGAGAAA GGCAACTAGC AAGACGAGCT CAAAAAGGTG ATCAGAAAGC CAGAGACGAA
CTGATAAAGG CAAATTTAAG GTTAGTTATC AGTATAGCCA AAAGGTACAC GGGTAGAGGG
TTGACTTTTT TGGATTTGAT CCAAGAGGGA AATATCGGAT TGATAAAGGC TGTAGACAAA
TTTGACTGGA GAAAAGGTTT CAAATTCTCA ACCTATGCAA CATGGTGGAT TAGACAGGCA
ATTACCAGAG CCATAGCTGA TCAAGCAAGA ACGATTAGAA TCCCTGTTCA TTTAGTTGAG
ACTATAAACA GAATGAACAA AGTTATCAGA GAGTATTTAC AAGAAAACGG AGATTATCCT
TCAGCACAAG AACTTGCAGA AATTCTAGAT AAACCAGAAG ATAAGATTAA TGAAATCCTA
ATGAGTGCAA AAGATGTACT TTCTTTAAAC TCACCTATAT CTAGCGGTAA TGGTGATGAT
GAAGAATCTG AAACAGGAGA TTTTATTAGT ACCGAAGAAA CAACCCCGGA AGAAGAAGCT
CAAAAAATGA TTATGAAAGA AAGACTGGAG GAAGTTCTTG ACACCTTAAA CTCTAAAGAA
GCGTTGGTTT TGAAAATGAG ATATGGATTT TTAGATGGCA AACAAAAGAC ACTAGAAGAA
GTTGGACAGT TCTTTAACGT CACAAGAGAA AGAATAAGGC AGATAGAAAC TAAGGCGTTG
AGGAAATTGA GACATCCAAA CAGAGTAGCA CAACTAAAAG ATATTGTAGA AAGTTAA
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| Protein sequence | MKNKRISEKE EKKIMKSIEN IDFEDAEKDG DTVKVKVKKS HEEAKSVDTF ISLLINKAKN
KGNKLSYSDI DHAIPTDLSE EIDSDYIEKI YEALEAEGIE ILEEEVEEEE KDALNETEYE
NEEVEELFSD TELKMYDNIS LGDPIKIYLK EISKVELLSP SRERQLARRA QKGDQKARDE
LIKANLRLVI SIAKRYTGRG LTFLDLIQEG NIGLIKAVDK FDWRKGFKFS TYATWWIRQA
ITRAIADQAR TIRIPVHLVE TINRMNKVIR EYLQENGDYP SAQELAEILD KPEDKINEIL
MSAKDVLSLN SPISSGNGDD EESETGDFIS TEETTPEEEA QKMIMKERLE EVLDTLNSKE
ALVLKMRYGF LDGKQKTLEE VGQFFNVTRE RIRQIETKAL RKLRHPNRVA QLKDIVES
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