| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0609 |
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| Symbol | |
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| ID | 5757024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | - |
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| Start bp | 660842 |
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| End bp | 662116 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641301820 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001567666 |
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| Protein GI | 160902085 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000182504 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAA AAGACAAAAT CGAGGACTTC GAATCGGAGA GCACAGATTG CACTCAAGCT
GATAAAAGCT CAAAAGTCAA AAAATATTCC TTGTCTTTAA CTATTAAAAA TAATCCTAAT
GCAATCACCG ATGAAATTTT AAGAAAAATC AAAAAAAAGC TAGCTAAAGA TAAGAGCACA
GTAACCTTTG AAGAAATTGA TGAATCTATA CCTAGCCAAA TGCGTGAGGA TTTTACGTTA
GAATTTTTAA TAACGTTTTA CAATGAATTA AAAAAATCTA ATATTTCAGT AGTAGACGGC
TCTTCAGGTA ATTTCTGTGA AGAGGATGAA GAAAAAGAGT TAGAAGTCAA CGAAGAGTTT
AAAGATTCTG AAGAATACGA AGAGATTTTC GAAGATTTTT CCGATGTTGA AGTCGAGATG
TGTGATAATA TTTCGTTGCA GGATCCGATT AAAATATATT TGAAAGAGAT TAGTAAGAGC
AAATTATTAA CTCCTTCAAG AGAAAGAAAG CTAGCAAGAA GGGCGCAGAT GGGGGATAAA
AGAGCCAGAG AGGAACTTAT AAAAGCTAAT CTTAGATTAG TCATTAGTAT TGCAAAAAGG
TATGTTGGCC ATGGATTAGG CTTTTTGGAT CTCATACAAG AAGGAAATAT TGGTTTAATG
AAAGCTGTTG CTAAATTTGA TTGGAAAAAA GGTTACAAAT TCTCTACTTA TTCTTATTGG
TGGATACGCC AGGCTATAAC AAGAGCGATT GCTGATCAAG GAAGGACTGT AAGAATTCCA
GTACATTTGG TAGAAACGAT TAATAGAATG AATAGGGTCG TAAATAAGTA TATTCAAGAA
AATGGAGAAG TACCTGATTT AGAAGAACTC TCTGTTTTGA TGGACAAGCC GGTAGATAAG
ATGAAAGAGG TATTAATTAG TGCCAAAAAT ATATTCTCCT TAAATGCCCC GATTTCTAAT
GATGTAGATG CTGAAGGAGA AAGTGAGGTA CTCGATTTTA TTGATTCTGA TTCACCTACC
CCTGATGAAG AGGGAAGGAA GATGATTATT CGTCAAAAAA TGGAAATGAT CATTGATACA
CTTTCACCTA AGGAAGCTAT GATACTAAAA ATGAGATACG GTTTCGTAGA TGGGAAACAG
AAAACTCTCG AAGAGGTCGG AGAATTTTTT AACGTAACAA GGGAAAGAAT CAGGCAGATA
GAGTCCAAAT CTATCAGGAA GTTAAAACAT CCGGCTAGAA AAAAGATGAT AGAAAATATT
ATCCAGGAAT ACTAA
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| Protein sequence | MIEKDKIEDF ESESTDCTQA DKSSKVKKYS LSLTIKNNPN AITDEILRKI KKKLAKDKST
VTFEEIDESI PSQMREDFTL EFLITFYNEL KKSNISVVDG SSGNFCEEDE EKELEVNEEF
KDSEEYEEIF EDFSDVEVEM CDNISLQDPI KIYLKEISKS KLLTPSRERK LARRAQMGDK
RAREELIKAN LRLVISIAKR YVGHGLGFLD LIQEGNIGLM KAVAKFDWKK GYKFSTYSYW
WIRQAITRAI ADQGRTVRIP VHLVETINRM NRVVNKYIQE NGEVPDLEEL SVLMDKPVDK
MKEVLISAKN IFSLNAPISN DVDAEGESEV LDFIDSDSPT PDEEGRKMII RQKMEMIIDT
LSPKEAMILK MRYGFVDGKQ KTLEEVGEFF NVTRERIRQI ESKSIRKLKH PARKKMIENI
IQEY
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