Gene Pmob_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0540 
Symbol 
ID5757968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp593972 
End bp594850 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content32% 
IMG OID641301744 
Productauxin efflux carrier 
Protein accessionYP_001567597 
Protein GI160902016 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGCAC TTATAAACTT CGTAATAATA GCAACCATAG GAAATATATC TAAAAGATTT 
TTACCTAAAA ACACAGGTGA GATTCTAACA ACTTTGATAA TCAATTTTAC ACTTCCCATG
ACTGTATTTA TAGGAGTAAC TTCATCTCAA ATAGATTTAT CCAAATTATT TTTTGTTCTG
ATAGGCTTTT TAGGTGGTTT ACTGATCTTT TGGGGCGGAA AATTTTTAAT AAGAACTTTA
AAAATCGAAG ATGTAAAAAT AAGTACCGTA ATACTATTAG CTTTTTGTGG ATTGAATATA
GGACTTTTCA TGTACCCTTT GGCAGAGATG TTATGGGGGA TTGAATCCAT AACTTACTTT
GCACTTTACG ACTTAGGAAA CAGTTTTATA GTATTTGGAG TTGGCAAGTC TGTTGCTGAA
GGAAAAGGTG GAAAGTTTCA TATTGTAGAC CTGTTTGAAT TTCCTCCCTT TATAGCTTTA
ATTATAGCTT TTCTACTAAA CGGCGTTAAT TTACCTGAAT TAATACTTTC TCCTATGATG
GTCATAAAAG ATGCCAATAA TTTTTTGATA ATGTTTTTAG TAGGTTTTTA TTTCAATATA
GTATCTCTAA AAGCTCACAG AAGGATCTTA ACGATTTCTG TAACCACAAA GTATTTATTG
GGGCTTATAG TTTCGTTATT CACTTTACTA ATCCCTGTAA GTACAGAACT GCAAAGAATT
TCTCTTTTTC TTTCCCCATT GCTACCAAGT GCAATGATGG CGATCGTTTA TTCGGTAAAA
AACAACTATG ACTCCGAACT CGCTAGCAGT TTCGTGAGTC TGACAACTCT TATTTCTTTC
ATAATTGTAT TTGTTGTAAC AGCGATAATG GGGTTTTGA
 
Protein sequence
MTALINFVII ATIGNISKRF LPKNTGEILT TLIINFTLPM TVFIGVTSSQ IDLSKLFFVL 
IGFLGGLLIF WGGKFLIRTL KIEDVKISTV ILLAFCGLNI GLFMYPLAEM LWGIESITYF
ALYDLGNSFI VFGVGKSVAE GKGGKFHIVD LFEFPPFIAL IIAFLLNGVN LPELILSPMM
VIKDANNFLI MFLVGFYFNI VSLKAHRRIL TISVTTKYLL GLIVSLFTLL IPVSTELQRI
SLFLSPLLPS AMMAIVYSVK NNYDSELASS FVSLTTLISF IIVFVVTAIM GF