Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0540 |
Symbol | |
ID | 5757968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 593972 |
End bp | 594850 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641301744 |
Product | auxin efflux carrier |
Protein accession | YP_001567597 |
Protein GI | 160902016 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGCAC TTATAAACTT CGTAATAATA GCAACCATAG GAAATATATC TAAAAGATTT TTACCTAAAA ACACAGGTGA GATTCTAACA ACTTTGATAA TCAATTTTAC ACTTCCCATG ACTGTATTTA TAGGAGTAAC TTCATCTCAA ATAGATTTAT CCAAATTATT TTTTGTTCTG ATAGGCTTTT TAGGTGGTTT ACTGATCTTT TGGGGCGGAA AATTTTTAAT AAGAACTTTA AAAATCGAAG ATGTAAAAAT AAGTACCGTA ATACTATTAG CTTTTTGTGG ATTGAATATA GGACTTTTCA TGTACCCTTT GGCAGAGATG TTATGGGGGA TTGAATCCAT AACTTACTTT GCACTTTACG ACTTAGGAAA CAGTTTTATA GTATTTGGAG TTGGCAAGTC TGTTGCTGAA GGAAAAGGTG GAAAGTTTCA TATTGTAGAC CTGTTTGAAT TTCCTCCCTT TATAGCTTTA ATTATAGCTT TTCTACTAAA CGGCGTTAAT TTACCTGAAT TAATACTTTC TCCTATGATG GTCATAAAAG ATGCCAATAA TTTTTTGATA ATGTTTTTAG TAGGTTTTTA TTTCAATATA GTATCTCTAA AAGCTCACAG AAGGATCTTA ACGATTTCTG TAACCACAAA GTATTTATTG GGGCTTATAG TTTCGTTATT CACTTTACTA ATCCCTGTAA GTACAGAACT GCAAAGAATT TCTCTTTTTC TTTCCCCATT GCTACCAAGT GCAATGATGG CGATCGTTTA TTCGGTAAAA AACAACTATG ACTCCGAACT CGCTAGCAGT TTCGTGAGTC TGACAACTCT TATTTCTTTC ATAATTGTAT TTGTTGTAAC AGCGATAATG GGGTTTTGA
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Protein sequence | MTALINFVII ATIGNISKRF LPKNTGEILT TLIINFTLPM TVFIGVTSSQ IDLSKLFFVL IGFLGGLLIF WGGKFLIRTL KIEDVKISTV ILLAFCGLNI GLFMYPLAEM LWGIESITYF ALYDLGNSFI VFGVGKSVAE GKGGKFHIVD LFEFPPFIAL IIAFLLNGVN LPELILSPMM VIKDANNFLI MFLVGFYFNI VSLKAHRRIL TISVTTKYLL GLIVSLFTLL IPVSTELQRI SLFLSPLLPS AMMAIVYSVK NNYDSELASS FVSLTTLISF IIVFVVTAIM GF
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