Gene Pmob_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0536 
Symbol 
ID5756868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp588638 
End bp589747 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content29% 
IMG OID641301740 
Productdiguanylate cyclase 
Protein accessionYP_001567593 
Protein GI160902012 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.190341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATATA TAATCATTTC TATTGTAATT TTGTTAATAT TGGTCTATGT TTTTTATATA 
GGGATAAAAA CTGCAATCTA TGTTAGAAGA ATCGCTAATG AAAAAGATAA ACCACCTGCT
TTCGCTCCTC CCAGTCCGAA AAAGGTTATA AGACATAGAT TTAAAGGTTC TCTTTTTGAA
ACGGCTATTA CTTGTTTAGA AAATGAGGTC GAAAAGGATT ATGCACTTAA ATCTATTATA
GAAAAGTTAC CTCTCTTTTT AAAAGCCGAT TCTTGGAGTT TTTTATTGAC TCCCAATAAT
GACGAATGGA GATTTTTATT TTGGTCAAAG AATTTAGACT TTCTTCCCTT AGAAGAAGTA
GCCAAAGAAA TACAGATTAG CGGAGAACAT ATAAAAAGGG TATTCAATAC AAAAAAAATA
CTTTTTATAA AAGATACTAA AAATAATACT CTTTGGAATC AAAAACATAG CTTGTCTAAG
TCTTGGCTGG GCATGCCGAT TATGGTAAAA AATGAGATAA TAGGTGTTTT GAATGTGGAT
TGGTTTAAGG AAGTAAAAGT ATCCAAATTT GAAAAAGAAT TGATAAATTA TTTTCTAGAA
GATATAGATA GGATTTTAAA AACGATTTTT TCTTTGAATG AACTGTTTCT AAGTTCAGAT
TTAGATATCT TAACTCAGGT GTACAATAGG AAAGCCCTTG AAAAATATAT TTCTCAACAT
AAATCTGATA GTTCAAAAAA GGCCGTTATT TTTTTGGACT TTGACAATTT TAAACAGATT
AACGATAATT TTGGTCACAC CGTAGGGGAT CAAGCTTTAA AACTCCTTAC AAAGAGAATT
CAAAATTCTA TTAAATCTGA TGATTTAATC TTTAGGTACG GAGGAGACGA ATTTGTTATA
ATAATAAATG AAATAAGAGA GAACAATAGT ATTGACATAA TAATACAAAG GATCAAATCA
ACTGTTAAAA CCCCAATAAC AATCAACGAT ATCTTGATAA TATCTTCTAT CAGTGTTGGT
TACTGTCTTG TTCCTCAAGA AGCTCCTGAT ATTGAGAAAG CCATTGAAAT AGCCGATAAA
AAAATGTATT TGCAAAAAGA AATACATTAA
 
Protein sequence
MVYIIISIVI LLILVYVFYI GIKTAIYVRR IANEKDKPPA FAPPSPKKVI RHRFKGSLFE 
TAITCLENEV EKDYALKSII EKLPLFLKAD SWSFLLTPNN DEWRFLFWSK NLDFLPLEEV
AKEIQISGEH IKRVFNTKKI LFIKDTKNNT LWNQKHSLSK SWLGMPIMVK NEIIGVLNVD
WFKEVKVSKF EKELINYFLE DIDRILKTIF SLNELFLSSD LDILTQVYNR KALEKYISQH
KSDSSKKAVI FLDFDNFKQI NDNFGHTVGD QALKLLTKRI QNSIKSDDLI FRYGGDEFVI
IINEIRENNS IDIIIQRIKS TVKTPITIND ILIISSISVG YCLVPQEAPD IEKAIEIADK
KMYLQKEIH