| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0508 |
|---|
| Symbol | |
|---|
| ID | 5758470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 551615 |
|---|
| End bp | 552826 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641301707 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001567565 |
|---|
| Protein GI | 160901984 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000199641 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGAT TTATTGGTAT GGTTTTTGTG GTTTTGTTGC TAGTTTCAGG CTTTTCGGAA
GTAGGGGTAA CTGATGATAA GATCTTAGTA GGTACTTTTC AAGCCATGTC GGGACCTGTT
GCACCTATAG GAAGACCAAT GGCGCAGGGT ATGCAAGCTT ATTTTAATTA CATCAACGAC
AACGGTGGTA TCTACGGAAG ACAGATTGAG TTAATAGTAG CTGATGATCA GTTCAATCCT
GCTAAAACGG TTGTAGAAGT TAGAAGGATG GTTGAGCAAG ATGGAGTTTT TTCCATCGTT
GGAGGACTAG GAACTCCAGG TATTTTAGCT GTACAAGATT ATCTGAATGA CAACGGTGTT
CCCTTTGTTT ATCAAGGTGG GGGTTCGATA GAGTTCAGTC TTCCACCCAG AGAGTATATT
TTCCCGGTTC AACCGAATTA CATAGTAGAA GCGAACATAG TAATGAATTA TTTGGTAGAA
AAGGGCCATG AAAGAATAGC AATCGTTTAT AGGAATGCAG AAGATGGTCA AGAGTTCAGT
AATTCAGCGG TAGGTACATT AAAAGCTTTG GGGATGGAGC CCGTTGCAAA CATAGCAGTG
GATCCTTTTA AAAGTGACTT CACATCTGAA GTAACACGTT TGTTATCAGT TAAACCTGAT
GCCGTAGCTG TTATGTTGTT CCTTCCCCAA TCAGTTGGAT TTGTTCGCCA AGCCAAACAA
TTTGGAATGA CCGATCAAAG GTATCTTCTG ACCTATTCAA ACGCAGATGT GAGTTATCTA
CAATTAGCTC AAGAAGCAGG AGACGGTGTT GAGGTAATGG CTTGGGTTGC CGTGGATTTT
ACAAACCCCG AAGAACCCGC GATAAAAATA TGGCAAGAAT ATTATGAAGG TATTCCTAAT
GCTTATGCTA TCGCTGGTAT GATAGCGGCA GAAGTTTTTG TCGAAGGGGT TAAAAGGGCA
GGTCCTGATT TGACTAGAGA AAGTTTAGTT TCAGCTTTGG AGACTTTAGA CAATTGGAAG
GGCAATTACA TTACACTTGG TGATGAAAAT CATGGTTTGA GCTATAAGCC GGTGTCCTCA
GGCTTTGATT CTCGAATGGG AATGACTTCT ATGTATGTTC TAAAATCTGT TTTAACCGAT
CAAGGATTAG TTTGGGACTT TGCTTCAAGT TGGATACATT ATTCTGTTGA ATCGTTGTTA
GAAGTTTTAT AA
|
|---|
| Protein sequence | MKRFIGMVFV VLLLVSGFSE VGVTDDKILV GTFQAMSGPV APIGRPMAQG MQAYFNYIND
NGGIYGRQIE LIVADDQFNP AKTVVEVRRM VEQDGVFSIV GGLGTPGILA VQDYLNDNGV
PFVYQGGGSI EFSLPPREYI FPVQPNYIVE ANIVMNYLVE KGHERIAIVY RNAEDGQEFS
NSAVGTLKAL GMEPVANIAV DPFKSDFTSE VTRLLSVKPD AVAVMLFLPQ SVGFVRQAKQ
FGMTDQRYLL TYSNADVSYL QLAQEAGDGV EVMAWVAVDF TNPEEPAIKI WQEYYEGIPN
AYAIAGMIAA EVFVEGVKRA GPDLTRESLV SALETLDNWK GNYITLGDEN HGLSYKPVSS
GFDSRMGMTS MYVLKSVLTD QGLVWDFASS WIHYSVESLL EVL
|
|---|
| |