Gene Pmob_0506 details

Gene Information

• Locus tag: Pmob_0506
• ID: 5758550
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: -
• Start bp: 550112
• End bp: 550810
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641301705
• Product: ABC transporter related
• Protein accession: YP_001567563
• Protein GI: 160901982
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00971431
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATGC TTGAAGTTGA AAATTTGGAA GTTAATTATG GTCATGTAAA GGCGGTAAAA 
AAAATTTCTT TTTCTGTGAA TAAGGGTGAA ATTGTTACCA TTTTGGGCTC CAATGGAGCT 
GGTAAAACTT CAACACTTTT TGGAGTTTTG AATATAGTTA AATCTAAAGG TAAAGTAATT 
TTTGAAGGTG AAGATGTAAG TAATAAAAGT ACTGTTTATA TGGTAAAAAA AGGGATTGTG 
TTATGTCCTG AAAATAGAAG AATCTTTTCA AGTTTAACAG TCGAAGAAAA TTTGAAAATG 
GGAACGTACT TAAGGGGAGA TTATTCAAAA AATTCTGGAT ATGTTTACGA TCTTTTCCCT 
GTTTTAAAAG AGAGAAGGAA GCAGAAAGCA GGTTCGTTAT CTGGAGGAGA ACAACAGATG 
TTGGCGTTAG GCAGGGCGCT TATGGCTTCT CCAAAGTTGT TGATGTTAGA TGAGCCTTCC 
TTGGGATTGG CACCAATAAT TATTGATGAA ATATACAGTG TATTAAAAAC TTTAAAAGAA 
TCTAATATTC CAATTTTGCT CGTGGAACAA AACGCGATAA AATCACTAAA AATAAGTGAT 
AGAACTTATA TATTAGAAAA TGGTAACGTT GCACATCAAG GAGTATCCAA GGAAATGTTG 
AATGATGAGA GATTAAAAAA GTCATATTTG GGGAAATAA 

 

Protein sequence

MKMLEVENLE VNYGHVKAVK KISFSVNKGE IVTILGSNGA GKTSTLFGVL NIVKSKGKVI 
FEGEDVSNKS TVYMVKKGIV LCPENRRIFS SLTVEENLKM GTYLRGDYSK NSGYVYDLFP 
VLKERRKQKA GSLSGGEQQM LALGRALMAS PKLLMLDEPS LGLAPIIIDE IYSVLKTLKE 
SNIPILLVEQ NAIKSLKISD RTYILENGNV AHQGVSKEML NDERLKKSYL GK