Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0484 |
Symbol | |
ID | 5757464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 523713 |
End bp | 525299 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641301685 |
Product | glycoside hydrolase family 3 protein |
Protein accession | YP_001567543 |
Protein GI | 160901962 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.299278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAGTT TAGAGAAGGC TTTGGGGAAA CTATTCTTAA TAGGGATTCA AGGAACCTCT TTAAACAACG AAAATATGAA GGTTTTAAAA TCAACTTTGC CTGGGGTTAT CATTTTCTTT TCACGAAACA TAGAAAACAA ATATCAACTT AGCAAGTTTA TCGAAGATAT TAAAAATTTT TTAGATTACG AACCCTTATT TTGTATCGAT CAAGAAGGTG GAACGGTAGC AAGATTAAAA AAAGGATTTA CTGTTGTACC CAGCGCTATG GGTATAACTG CGACTAACGA AGCAGAGAAT GCATATCTTT CTGCAAATTT ACTTGCAAAA GAAATGTTAG CAGTTGGAAT CGATTGGAAT CTTGCTCCAG TTGTTGATAT CAACAACAAC CCAAAGAATT CTGTAATTGG AATTAGAAGT TTTTCCGATG ATAAAAATGT GGTACTAAAG TTTGCCCGTG AATATGTGAA GGGATTGCAT GACGGGGGAG TACTTTCTTG TCTAAAACAT TTCCCTGGTA TTGGGAACGT CAACACCGAT CCTCATTTAG ACCTTCCCCA AGGCGAATTA AGCAAAGATG ATCTTCTTTC AACAGAGTTA TTCCCGTTTC TAAATATTGA TTCTCCTTCA TGGATGCCGA CTCATGTGTA CCTTTCCAAG ATACAAAATA AAAAAGAACC AGCATCTTTA TCAGAAGAGA TTTTAACAGG ATTGGCAAGG GAAGAACTAA AATATAAAGG AGTTTTGGTT GCGGATGATT TTGAGATGGG GGGAGTAGCA AACTTTTATT CAGCCCAAGA GGCAGTAATA AAATCACTGA ATGCCGGAAT GGACATAGTT AGTATCTGCC ATTCTTTTGA AAAACAATCA GCAGCCAAAA ACGCTGTATT GAGAGAGTAT AAAAATAACG AAAATTTTAA AAAGAAGATA AATTCATCAC TAGAGAGAAT CCAATCGTTA ATGAAAATTT CAGCAGATTT GAGGGAGAAA AACAATAATA AAATATCACT AGAAGAAATT GGCAAAAAAG AATATATAAA CTTAGCTAAA AATATTTTTG ATAAATCTAT CACTGTTCTT AATATGTCTC ATGACAAAAG CTTTTTGCCT TTAAAAAACG TTGATGAAAT TTATTACTTT GCTAAAGAGT CATTATCTTA CGGAATCGAA GACAAAAGAA CACAAATTTC TTATATTATT GAGCCAATAT CAAAAGAACT CAAAGCAAAA GTAAACATTT TAGAAACGAG TAAAATAATT GACCCTCTGG TAAGGGAAGA AATAATTCAA AACTCTAAAA ACAAAACTAT CTTGGTTCTA GCTGAAAATG CATATTTGCA TTCAGAATTG GTTGATTTGA TAAGTAACAT GTCCCAAAAA TCAAAAAAAC TAATTTTAGT TGCTTTAAGA AACCCATATG ACGTATTTAT TCCTAAAGTA AAGTACGGAA TTTGCACATA CGGTTTTAAT GAAAATATTC AAACTTCTTT GCTTAAAATT CTCAAAGGAG AAATAAAACC AACTGGGAAT TTACCAATTA AACGGAGGCT AGAAAATGCT AGAGAATCTG GAAACCGAAA AAAGTAA
|
Protein sequence | MESLEKALGK LFLIGIQGTS LNNENMKVLK STLPGVIIFF SRNIENKYQL SKFIEDIKNF LDYEPLFCID QEGGTVARLK KGFTVVPSAM GITATNEAEN AYLSANLLAK EMLAVGIDWN LAPVVDINNN PKNSVIGIRS FSDDKNVVLK FAREYVKGLH DGGVLSCLKH FPGIGNVNTD PHLDLPQGEL SKDDLLSTEL FPFLNIDSPS WMPTHVYLSK IQNKKEPASL SEEILTGLAR EELKYKGVLV ADDFEMGGVA NFYSAQEAVI KSLNAGMDIV SICHSFEKQS AAKNAVLREY KNNENFKKKI NSSLERIQSL MKISADLREK NNNKISLEEI GKKEYINLAK NIFDKSITVL NMSHDKSFLP LKNVDEIYYF AKESLSYGIE DKRTQISYII EPISKELKAK VNILETSKII DPLVREEIIQ NSKNKTILVL AENAYLHSEL VDLISNMSQK SKKLILVALR NPYDVFIPKV KYGICTYGFN ENIQTSLLKI LKGEIKPTGN LPIKRRLENA RESGNRKK
|
| |