Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0477 |
Symbol | |
ID | 5756648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 515424 |
End bp | 516716 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641301678 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001567536 |
Protein GI | 160901955 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG ATAAAGATGG TGTATTGGAA ATTTCTGGGG TAAAAAGTAC TCACTTAGCT AACGAGTATG GTACTCCATT ATTAGTATTG GATGAAGCTC AAATTAGGGA GAATATCAAA AGGTTAAAAA GTGCCTTCGA GAGTGCTGAT TATACTAATT ATGAAATCGC TTATGCTTCG AAGGCATTTT TGAATACAGA GCTTTGTAGA ATTTTACAAA GTGAAAATGT GTCTTTAGAT GTGGTTTCGG GTGGAGAACT GTATATAGCC TTTCATAGTT CTTTTCCTGC AAACAAAATT TTTTTTAACG GAAACAGTAA GACTAACGAA GAATTAGTTA TGGCTCTAGA GAATGATGTA GGTCACATTA TAGTTGATAA TGAAGATGAA TTTAGAAACA TTGAAAGGAT CAGTAAAAGA TTAAGAAAAA AGGCAAAAAT TTATTTTAGG GTTATCCCCA ACATTACTCC AGACACTCAT AAGTATATTT CAACCGGTCA AAAAGATTCC AAATTTGGGA TGTCTTTTGA TGACATGTTG AAACTTATTA AATCCATCAA AAATTCTGAA AATTTGGAGA TAAAAGGTAT TCATGCACAT ATAGGTTCTC AAATAAACGA GGCAGAACCT TATGTGGAGT TAGTAAAGAC TTTTTTTGAT CTTTTGAACA AAATAAGAGA AGAAACAGGG GCTGTTTTAC CAGAAATTGA TATTGGTGGA GGATTCGGTG TAGCGCACTC GACTTTTGAA AAAGCTATAG ATATTCAGGA GGCTATAAAA GGAGTCATTC AAGAAGTTAG ATTTTTATCA AGTAAATTTC ATTATCCTTC TCCAAAAATA ATAGTAGAAC CAGGTAGATA TATTATTTCT AGCGCTGGAA CCACACTGTA CACTGTTGGC ACAATCAAGA GAACAGAAAA TAAAAAATAT GTGGTTGTTG ATGGAGGCAT GGCTGATAAT ATTCGGCCTG CATTATATGG TGCAAAATAT GAGGTGTTTA TTGCGAATCG GCCAAAAGAT ACAATCAACT TAGAAAAGGT TACAATAGCT GGTAGGGCCT GTGAATCAGG AGATATTTTG ATTGAAGAGA CTTGTCTTCC AGAAATAAAA CCTGGAGATT TGTTAGCGAT CCCATCTACT GGAGATTATA CCAATTCGAT GTCAAATAAT TATAATGGTT TTCTAAAACC CGCCATTGTT TTAGTCAAGA ATGGGAAACA TAAGCTGATA ACAAGAAGAG AAGTTTACGA TGATTTGATA AAAAGGGATA TCGAAAATAG CGAATGGAGA TAA
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Protein sequence | MKIDKDGVLE ISGVKSTHLA NEYGTPLLVL DEAQIRENIK RLKSAFESAD YTNYEIAYAS KAFLNTELCR ILQSENVSLD VVSGGELYIA FHSSFPANKI FFNGNSKTNE ELVMALENDV GHIIVDNEDE FRNIERISKR LRKKAKIYFR VIPNITPDTH KYISTGQKDS KFGMSFDDML KLIKSIKNSE NLEIKGIHAH IGSQINEAEP YVELVKTFFD LLNKIREETG AVLPEIDIGG GFGVAHSTFE KAIDIQEAIK GVIQEVRFLS SKFHYPSPKI IVEPGRYIIS SAGTTLYTVG TIKRTENKKY VVVDGGMADN IRPALYGAKY EVFIANRPKD TINLEKVTIA GRACESGDIL IEETCLPEIK PGDLLAIPST GDYTNSMSNN YNGFLKPAIV LVKNGKHKLI TRREVYDDLI KRDIENSEWR
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