Gene Pmob_0463 details

Gene Information

• Locus tag: Pmob_0463
• ID: 5757820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: +
• Start bp: 497706
• End bp: 499736
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641301663
• Product: alpha amylase domain-containing protein
• Protein accession: YP_001567522
• Protein GI: 160901941
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.694726
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTATTC TATCTGAACT TAATAAATAC TTACAAAGTA AAATCTCACA GGGTAAAGAC 
GATTATGCAA TACCGAAAAG ATGGATGCCA CCTAATTATA CCGGTAAAGT TAAACTAGCT 
GGGAGGAAAT TTTTTGTTAA TCCCTATGAG TTTATATCCA ACATAATCGA TAATCTATTA 
AAAAATGCTG GAAAAGATGT GGATTACAGC AAACCCCTTT CTTTCATTAA AAATGTTAAA 
GAACCTGATT GGATAAGAAC GAGCATACTT TATTCTGCTC ACGTACGAGC TACAGCTGCA 
TATGTTCATG ATCAAACTAC TTTATTCGTT CCAATAGATG AAAAAGGTTA TACTGAATCG 
GGTACATTCC TAAAAATGTT GATGTTAATC CCTTATTTTT CTACGTACAA AGTCGATAGT 
ATATACTTAC TTCCAATAAC TCAAGCCAGC AGTAAATTTA AAAAAGGTGA AGTTGGTTCG 
CCTTATGCAG TTAAAAATTT CTTCTCTGTA GAAAAAGATT ATCACGACAC ACTTTTGGAA 
AATGAATTCA CCCCTAATGA AGAATTTGGA GCTTTTGTCG AAGCCGCTCA TATGGCTGGA 
ATGAGAGTCT TGTTGGATTT TGTACCAAGA ACAGGATCAA GGGACAATGA CCTTATTTTA 
GAACATCCCG AATGGTTCTA TTGGATAGAT ATAGACGAAA TGAACGGTTT TGCACCTCCT 
AAAGTTGAAG GTCTGGGATT TGTTCAACCG AGCAAAGAAA ATTTAAAAAT TGTGTACAAT 
GACGAACAAG TCAAAAATCA TCTTAAAAAA TTTAGATGGG ATCCAAGAAC TCAGAACCCA 
CAAAAATGGG AAAATTTTAT AAAACTAAAT AAAGACAACC CAGATTTTTT GGATGAAATA 
GCAAGAGAGT TTAAAGTAAT AACCGTTCCA GGATTTTCAG ATTGGATAAA TGATCCCCAA 
CCAGCATGGG AAGATGTCAC TTTCTTAAGA CTCTATCTTT CTCATCCAGA AGAAGCTCTA 
AAATATATAG ACGAGACAAA TCAACCTCCT TATGTGCTCT TCGACGTAGT TAAATCAAGT 
TTGTTCCCAG GGAAAGAAAA GAATGCCGAA CTTTGGAACC TAATAGCAAA TATTATTCCA 
TTCTATCAAA AAAATTTCGG TATAGATGGT GCTAGGTTGG ACATGGGTCA CGCTCTACCT 
GATGAACTTG AAGCTGAAAT TATAAAAAGG GCAAAAGAAT ACGACCCTGC CTTTGTAATC 
ATAGCTGAAG AATTGAACAT GGACAATCAT TTAAAAGCTA AAAAAAGTGG TTACGATGGA 
ATTTTGGGAA ATTCATGGTG GGCTGAGCCA AGAATAAAAG AAGGCTGGTT CAAAAAATTC 
ATCTCAGAAG TAGCACCAAA ATTATCTTTA CCTACATTTG CAACGGCAGA GACACCAGAT 
ACCCCAAGAG CGGTTACAAG AGAAGGTGAA GAAACTTTCT CAAAATTGAC AGCGGTGGTA 
AATACTTTCA TGCCAAACGG AATAACATTT ATAAACTCCG GATATGAGCT TTTTGAACCT 
CAACCTATGA ACACAGGCTT AGATGTAGAA GATCCTGTGG AAGAAAGATT TAAAAATTTA 
CCTTCAACAG ATCAATTTTA TGGCAAACTC GCATTCTTTG ATTGGTATGT CCTACACTGG 
GATACAGACC ATCATATGGT GAAATTACTT TCCTTATTAG GCACACTAAA AGAGGAAGTC 
AAAGATCTTT TGAAAAATTC TAACAATTAC CATTTTATTG ATTTTTCTGA TGACGCAAGT 
GCGATGTTTT GGTGGAACGG AGAAAAAGGA GTTGTAATAG CTATCAATAC TAACTTTAAA 
AATCCTTATT TCTTCGATAT AGACCTTGGA TATTATACCT GGAAAAGTGA GCATAACATA 
CAAACAAAAT TGGAAAATTA CAGAAGAGGC GAAAGCTCTT GGAACGTTCA GGATGCACAT 
TTAAGAGTAA CAATCAATCC AGGGGAAGCC AGAGTTTTTT TTGTATATTA A 

 

Protein sequence

MPILSELNKY LQSKISQGKD DYAIPKRWMP PNYTGKVKLA GRKFFVNPYE FISNIIDNLL 
KNAGKDVDYS KPLSFIKNVK EPDWIRTSIL YSAHVRATAA YVHDQTTLFV PIDEKGYTES 
GTFLKMLMLI PYFSTYKVDS IYLLPITQAS SKFKKGEVGS PYAVKNFFSV EKDYHDTLLE 
NEFTPNEEFG AFVEAAHMAG MRVLLDFVPR TGSRDNDLIL EHPEWFYWID IDEMNGFAPP 
KVEGLGFVQP SKENLKIVYN DEQVKNHLKK FRWDPRTQNP QKWENFIKLN KDNPDFLDEI 
AREFKVITVP GFSDWINDPQ PAWEDVTFLR LYLSHPEEAL KYIDETNQPP YVLFDVVKSS 
LFPGKEKNAE LWNLIANIIP FYQKNFGIDG ARLDMGHALP DELEAEIIKR AKEYDPAFVI 
IAEELNMDNH LKAKKSGYDG ILGNSWWAEP RIKEGWFKKF ISEVAPKLSL PTFATAETPD 
TPRAVTREGE ETFSKLTAVV NTFMPNGITF INSGYELFEP QPMNTGLDVE DPVEERFKNL 
PSTDQFYGKL AFFDWYVLHW DTDHHMVKLL SLLGTLKEEV KDLLKNSNNY HFIDFSDDAS 
AMFWWNGEKG VVIAINTNFK NPYFFDIDLG YYTWKSEHNI QTKLENYRRG ESSWNVQDAH 
LRVTINPGEA RVFFVY