Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0426 |
Symbol | |
ID | 5757649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 460248 |
End bp | 461666 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641301629 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001567489 |
Protein GI | 160901908 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0566133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGATG CGAAGGGACA CGGAAAAAGC ATACAACTTC GATTAGAAGG TTTCCTACAT GAAGATAAGG GAGAGCCTGA AAATAATGTA GAAGCGCCTA GTATAACTTC TACGTCTGAA AGAGGAAGAA ACGATGATAA GGGATGCAGT GAAGGGATGC TTGAAAAGAT ATTATCCAAG GATAATATGA ATAAAGCATA CAAGAAGGTA AAGGCCAACA AAGGAGCCCC TGGGATAGAC GGGATGAAAG TAGAAGAACT CTTTGGATAT CTCAGACAAC ACGGAGAAGA ATTAAGGCAA GAGCTCCTTG AAGGAAGGTA CACCCCGAAG TCGGTAAGGA GGAAAGAAAT ACCGAAACCG GATGGAGGGA AAAGACTACT AGGCATACCA ACATCAATTG ACAGAGTAAT CCAGCAATCC ATAGCCCAGG TGTTGACACC TATTTACGAA AAGAAATTTG TAGATAACAG TTATGGATTC AGGCCATTAC GGGATGCAAA ACAAGCCATA CGAAAAAGCA AAGAATACCT AAACAAAGGG CATACATGGG TAGTGGACAT AGACTTAGAA CGCTACTTTG ACACAGTCAA CCATGACAAA CTGATGAGGA TAATATCAAA AGACGTAAAA GATGGCAGAG TGATATCCCT GATAAGGAAA TACCTCAAGA GTGGGGTAAT GGTAAATGGG GTAGTAATAG AAACTGAAGA AGGGACTCCA CAAGGGGGAC CGCTATCCCC ATTACTAAGC AACATAATGC TCCACGAACT TGACGTAGAA CTAACGAAAA GGGGACACAA GTTTTGCAGG TATGCAGACG ATTGCAACAT ATACGTGAAA AGCGAGAAAT CCGCATATAG GGTGATGGAA AGTATAACAA AATACATAGA GAAGAAATTA AAGCTAAAAG TGAATAGCAA GAAAAGCAAA GTAGTCAGAC CTTGGGACCT CAAATACTTA GGGTTCTCCT TCTACGTGAA AGAAGAGAAG TACGAAATTA GAGTCCATGG AAAATCCATT AAAGAATTCA AAAAGAAGTT AAAAGGAGAA ACGAAGAGAA GCAGTGGAAG AAGCATGGCA TACAGGCTGT CAAGGATAAA ACAAATAATA ACAGGATGGA CAAACTACTA TGGAATAGCA AACATGAAAT CGATAGCGGG AAGTCTTGAT GGATGGCTTA GAAGGAGAAT TAGGATGTGT ATCTGGAAGG AATGGAAGAA AATCAAAACA AGGTATAAAA ACTTAGTCAA ATTAGGGTTA AACATCTACA AAGCATGGGA ATATGCAAAT ACAAGGAAAG GCTATTGGAG AATCTCCAAC AGCCCCATAC TTTCAAGAAC ACTAACTAAT AAACACCTTA AGAAAATGGG GTTAACTTCG ATCCTGGAAA CGTATAACCT AAAGCATGAA TTCTGTTGA
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Protein sequence | MKDAKGHGKS IQLRLEGFLH EDKGEPENNV EAPSITSTSE RGRNDDKGCS EGMLEKILSK DNMNKAYKKV KANKGAPGID GMKVEELFGY LRQHGEELRQ ELLEGRYTPK SVRRKEIPKP DGGKRLLGIP TSIDRVIQQS IAQVLTPIYE KKFVDNSYGF RPLRDAKQAI RKSKEYLNKG HTWVVDIDLE RYFDTVNHDK LMRIISKDVK DGRVISLIRK YLKSGVMVNG VVIETEEGTP QGGPLSPLLS NIMLHELDVE LTKRGHKFCR YADDCNIYVK SEKSAYRVME SITKYIEKKL KLKVNSKKSK VVRPWDLKYL GFSFYVKEEK YEIRVHGKSI KEFKKKLKGE TKRSSGRSMA YRLSRIKQII TGWTNYYGIA NMKSIAGSLD GWLRRRIRMC IWKEWKKIKT RYKNLVKLGL NIYKAWEYAN TRKGYWRISN SPILSRTLTN KHLKKMGLTS ILETYNLKHE FC
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