| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0346 |
|---|
| Symbol | |
|---|
| ID | 5758384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 367869 |
|---|
| End bp | 368507 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641301549 |
|---|
| Product | RNA polymerase factor sigma-70 |
|---|
| Protein accession | YP_001567411 |
|---|
| Protein GI | 160901830 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0285516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGGC ATATCTATAG GCTAAGGGGA ATGAATTTGG ATAAACTTAT AGAACTTGCA
CAAATAGGGG ACAACCAAGC CCTGGGCATA ATTCTTGAAA AGTTTGAACC TATGGTGAAA
TCTATTGTTG GAAAGTATTA TGGTACATGG CTGGAATTCG AAGACTTTTT ACAAATAGGT
TTGGTAGGTT TAATTCAAGC GGTATATAAT TTCAGAAAAG ATGCAAACGC TAAATTTTCA
AGCTTTGCCT ATATGAATAT CTCTTCAGAG ATTAAGTCTT TTGTCACCTA CTTGAACAGA
AATAAGCATA AAGTTTTAAC AGAAGCTGTA AGTATGGAAA ACACAGACGA CGAATTTACA
GAAAATGCCG ATTATTATAT AGAAAGCGTT GATTCTGAAA AGAAGGATTT TCTCCAGGAA
TACTTTTTAT CAAAGAGTCT TGAACAACTC GAGTGCAACG AAAGGGAGAT TGTTGAATTA
TGGATAGATG GATACTCATA TCAAGAAATA GGGGATAAAA TGAAAATAAA TACAAAAAAG
GTCGATAACA CCATCCAGAA GATAAAAAAA GTTTTCGCAA GAAATATAGA AGAATACAAT
AATATAGCGG AGATGTTTGG AGGTAAGTAT GAAATTTAA
|
|---|
| Protein sequence | MSRHIYRLRG MNLDKLIELA QIGDNQALGI ILEKFEPMVK SIVGKYYGTW LEFEDFLQIG
LVGLIQAVYN FRKDANAKFS SFAYMNISSE IKSFVTYLNR NKHKVLTEAV SMENTDDEFT
ENADYYIESV DSEKKDFLQE YFLSKSLEQL ECNEREIVEL WIDGYSYQEI GDKMKINTKK
VDNTIQKIKK VFARNIEEYN NIAEMFGGKY EI
|
|---|
| |