Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0338 |
Symbol | |
ID | 5758292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 357575 |
End bp | 360682 |
Gene Length | 3108 bp |
Protein Length | 1035 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641301541 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001567403 |
Protein GI | 160901822 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.191067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAGTA AATGGAAGGT TTTTTGGGAC CCAAAGGCTT CTTATTATCA ACAAAAAGAT AAAGTTGCAA AAACCTTATC TAGTGCTTTG GGAATTTCCG ACTTTTTGGC AAAATTATTA GTATCTAGAA ATATTGAAAC ACCCGAAGAG GGAGATAAGT TTTTGAACCA TTTAGAATTG GAAAGCTTTG ACCCTTATTT GATGAAGGAT ATGTCAAAAG CCGTAGAAAT TCTCAAACAA ATTAAAGAAA AAAAGGAAAA AGTGGCGATC TTCGGTGATT ACGACGTTGA TGGGGTAACT GCAACTTCAG TTTTGTATCT TGGCTTAAAA AAAATAGGTT ACGATGTAAC TTCTTACATT CCATCTAGAA TAGAAGAAGG TTACAGCCTA AACGTTAAAG CTATAGAAGA GTTAAAAAGC AAAAATTATA ATAATATTAT TACTGTTGAT TGTGGTACAA CATCCATACA AGAAATTGAA TATGCGAAAA GTCTTGGAAT GAAAGTTATA GTTACCGATC ATCATTTACC CCAAGAAAAT CTCCCAAAAG CTGATGCAAT ATTGAATCCA AAGAGGGAAG ATGACAAATA TCCTTTCAAA GACCTGGCAG GAGTAGGCGT AACTTTTAAA TTGCTACAAG CCTTATACAA AAGTTACGAT AATTCTTTAG ACCCCTTTGA ATATATAGAT CTGGTGGCAG TGGGTACTAT TGCTGACATA GTATCGATAA CTTCGGAAAA TCGATACTTG GTTAAGATAG GATTGAACAA GTTAAAGACT AATCCAACCA AAGGCTTAAA ATATTTGCTC GATGAATTGA AAATAGTTGA TTCTGAGATA AATTCGCGCA CCATCACTTT TAAAGTTGCT CCGAAGATAA ACGCTGCTGG AAGAATGTCA GACGCAAGGT CTGCGTTTAA TTTGTTGATT GAGAAAGATG AAGAAAAATT AAAAAAGGCG GTTTCAGAAT TACTCCGACT AAATTCAAAA AGACAAAGTA CTGAAAAGGA AATCTATCTG TACTCTTTAA GTTTGTTAGA TTTGTACCCT GAATACAAAA AGGATCCGGT ATTGGTATTA AGCGGCGAAG ACTGGCATAT GGGAGTTCTT GGGATAGTGG CTTCCAAACT ATCAAATCAA TTCAATAAAC CCGTTTTGAT GATATCAAAA AATCAAGAAA TGGGTAAAGG TTCAGGAAGA AGTCCTCAGG GCATAGATTT AATGGAGCTC CTTCTCAAAG TCAATGAAAG AGGGATTTTT GAAGAGTTCG GCGGTCATAA GTTTGCTGCA GGTTTTTCCA TTCTTTCTAA AAATATAGAA GCTTTGAGAA AGGAGATTAA CGAGGTTTAC AAGGAGTTAT ATGGAGATAA AAAATTAACG TCTCAAATTG ATGTGGATAT GGAAATAGAA GGAATATGGG AAACGATGTT TGAAGATATA AACAAGTTAG AACCTTTTGG GTATGGGAAT CAAGAACCAG TTTTTTTGAT AAAAAACGCT AAATTAGAAA ACATAAGATT CTTTCGTAAC GGTTCTCAAA GTTTTTCAGG AACGCTCAAT AAAGATTCCT TAATCATAGA TATTTTAGGT TACGATTTGG GATACAGATT AAGCGAGCTA ACAGAGAATA GTAAAAAAGA CCTATTTACA GATCTTGTGG GTACCTTTAG AATAGAGAAC TCTTATAATT TAAAAAATAG TTACGTTAAA TTTTACTTGC AAGATTTGAT GGTTAATAAG GAAATACAAC AAGGTGAAAC TGCAAAATTG AACTTTGCAT CTAATGTTCT TCATGATGAG CTGAACAAGA TCATGAATAT AGAAATATTA AACGATAATT TAACTAGAAA TAAGGTAGCG ATGTTTCTTC CGAGTAAGAT CAAAAACGAT TCTTTACTGA AAAAAGTTCA GTTATCATTA GAAGAGCATC AAAAGTTGAT AATTGTTTCT GCAACAAATA GTTTATTGGA ACATATATAT AAGATAATAA ACACTTATTT TCCTGAGAAT TTATTATATT TTAACAATCA ATACATCCTT ACACCAGAAC TTATATCTAA TTATAGTGTG ATATTCGTTA CAGTACCCAA ATTTATTAAA AATCGTGAAT TACTTGATTC TATGCAAGCT GAAATTATTA TTGACGAACC CTTCTATTCA TTATTTCATC CGGTAGTGAG AAAAGTTCCT GAATATCAGC AATTTAGAAA ATATGCTCTT CAAAAGTCTA AAATTAGTAT TTTTAGTTCT ATTTACAGCG AAGAGCTAAA AGAATTATTA AAAAGAGCAG GATTTAAAAT CCTTATATCT TTCTCTAATA ATAATAGTTT TGAAGTGGTT AGAGAAAGAA ACAATATTCT GGGACTTTTG AAGGATTATA CAAATGAAAG AAATGGCAAA ATATTGGTTT TGAACGATTA TGAGAGGCAA AAATCTTTAG TGAGACTGTT AGACGAAAAA TTACAAGTTG ATGAGAACGA TATAAGACTT TTCAACCACT CAATGAGTTT TAGGGAAAAA CTTATTTCTA GAGAAAAATT TAAAAATGAA AAAGCTAATT TTTATATAAC TTCTTTTTCT AACAACGGTA TAGCGTTTGA GGTTAAACAA TTTTCTCCAA TTTTGATTAT TGTGGATGTT CCAAAGACGG ACATAGAGCT TTTAGACCTG GTTTCTACAT GGATGAAAAA AACTCAAAGA ACAACTATCA TATTGGCTTA CAATAATCGG TTCAAAGTTA AATTACTTTA CGAGTATTCA AGAAAATATC CATCTTTCAA AGTATTAAAA CTAGTCTATG ATTTTATAGC CGACGGTCAT TACAAAGTAG AGGAGATACA AAATTCTCTT TTGAAGGGTG ATAAATCGTT ATCAGAGACC GTTTTAAACG TGATGGAAGA TGCAGGGTTG ATAAAGGTGA ATGAAGAAGA AGTAGAAATA TTGAATAATT TTAATCTAAA GGATTTACGT GAAAGTTCCA ATTTTAAGGA AAATATATTA GATAATTGGA TATTGAAAAA TTCCATAAAT TTCTATGAAA ATTTAGACAC AAGAGAATTA ATTGAGTTCT TGAAAGGTAA TCCTAAAGAA GGAGCAAGAA GTTTATAA
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Protein sequence | MESKWKVFWD PKASYYQQKD KVAKTLSSAL GISDFLAKLL VSRNIETPEE GDKFLNHLEL ESFDPYLMKD MSKAVEILKQ IKEKKEKVAI FGDYDVDGVT ATSVLYLGLK KIGYDVTSYI PSRIEEGYSL NVKAIEELKS KNYNNIITVD CGTTSIQEIE YAKSLGMKVI VTDHHLPQEN LPKADAILNP KREDDKYPFK DLAGVGVTFK LLQALYKSYD NSLDPFEYID LVAVGTIADI VSITSENRYL VKIGLNKLKT NPTKGLKYLL DELKIVDSEI NSRTITFKVA PKINAAGRMS DARSAFNLLI EKDEEKLKKA VSELLRLNSK RQSTEKEIYL YSLSLLDLYP EYKKDPVLVL SGEDWHMGVL GIVASKLSNQ FNKPVLMISK NQEMGKGSGR SPQGIDLMEL LLKVNERGIF EEFGGHKFAA GFSILSKNIE ALRKEINEVY KELYGDKKLT SQIDVDMEIE GIWETMFEDI NKLEPFGYGN QEPVFLIKNA KLENIRFFRN GSQSFSGTLN KDSLIIDILG YDLGYRLSEL TENSKKDLFT DLVGTFRIEN SYNLKNSYVK FYLQDLMVNK EIQQGETAKL NFASNVLHDE LNKIMNIEIL NDNLTRNKVA MFLPSKIKND SLLKKVQLSL EEHQKLIIVS ATNSLLEHIY KIINTYFPEN LLYFNNQYIL TPELISNYSV IFVTVPKFIK NRELLDSMQA EIIIDEPFYS LFHPVVRKVP EYQQFRKYAL QKSKISIFSS IYSEELKELL KRAGFKILIS FSNNNSFEVV RERNNILGLL KDYTNERNGK ILVLNDYERQ KSLVRLLDEK LQVDENDIRL FNHSMSFREK LISREKFKNE KANFYITSFS NNGIAFEVKQ FSPILIIVDV PKTDIELLDL VSTWMKKTQR TTIILAYNNR FKVKLLYEYS RKYPSFKVLK LVYDFIADGH YKVEEIQNSL LKGDKSLSET VLNVMEDAGL IKVNEEEVEI LNNFNLKDLR ESSNFKENIL DNWILKNSIN FYENLDTREL IEFLKGNPKE GARSL
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