| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0258 |
|---|
| Symbol | |
|---|
| ID | 5757563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 276162 |
|---|
| End bp | 277094 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641301457 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001567325 |
|---|
| Protein GI | 160901744 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.325907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC ATATAAATGA CCCTTTGGAT GAAAATGCCT TAAAAAAATT ACAAAACGAA
TTACCTGATC TTGAAATTAC TTCGGAACAC CTCGAAAAAG ATGTCCTCAA AGATAAAATT
AAAGAAATTG ACGTATTAAT TGTAAGAAGT GCAACTAAGG TAACAAAAGA AATATTAGAA
CACGCAGATA AATTAAAGAT TGTAGCAAGA GCGGGCATGG GATTAGATAA TATAGATGTC
GATACTGCTA AATTGAAAGG AATAACCGTC TTAAATACGC CGGGCCAGAA TTCTTTATCC
GTTGCAGAAT TGGTTATAGG AATGGTTTTA GATATTTATC GGCACATTAC AAGAGGGACG
ATCGGTTTAA AAAATGAACA ATGGGAAAAA AAACAACTAG AAGGATTTGA GTTGTCACAA
AAAACCTTTG GTATCATCGG CTTTGGTTAT GTAGGAAAAA ATTTGGCACA ATTACTAAAA
GGTTTTCAGA CCAATACTCT GGTGTATGAT GTTTTTGAAA TAAGTGCAGA AGAGCAAAAG
AATTATAACG TTAGACAGGT ATCTTTGGAG GAGTTACTCC AAAATTCTGA TATTATTTCT
TTACATATTC CAAAAAACGA AAAAACTTAT CACTTTATAA GTGAACCCCA AATCAAAATG
ATGAAAGATG GTGCTGTAAT AATTAATGCT GCAAGGGGAG GCGTCCTCGA CGAGAATTAT
GTGCTTAAAT ATTTGAAAAA TGGCAAGCTC CTTGGAGTAG GATTGGATGT TTTCGAAGAA
GAACCTCCAA AAGGTGATTT TTACAAGGAA CTTTTTGCTT TACCAAATGT TGTCTTAACA
CCACATATAG GTGCTTCTAC AAAAGAAGCG CAAGAACGAG TGGGAATAAA TATAGTAGAC
AGAGTGGTAG AAGAAGTTAA GAAACTTAAC TGA
|
|---|
| Protein sequence | MKIHINDPLD ENALKKLQNE LPDLEITSEH LEKDVLKDKI KEIDVLIVRS ATKVTKEILE
HADKLKIVAR AGMGLDNIDV DTAKLKGITV LNTPGQNSLS VAELVIGMVL DIYRHITRGT
IGLKNEQWEK KQLEGFELSQ KTFGIIGFGY VGKNLAQLLK GFQTNTLVYD VFEISAEEQK
NYNVRQVSLE ELLQNSDIIS LHIPKNEKTY HFISEPQIKM MKDGAVIINA ARGGVLDENY
VLKYLKNGKL LGVGLDVFEE EPPKGDFYKE LFALPNVVLT PHIGASTKEA QERVGINIVD
RVVEEVKKLN
|
|---|
| |