| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0225 |
|---|
| Symbol | |
|---|
| ID | 5756771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 231238 |
|---|
| End bp | 232434 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641301425 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001567294 |
|---|
| Protein GI | 160901713 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.10258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGATAA AGAAAATCAA TGCAGAAAGA ATGGGATACT CAAACAAATT AATGGTTTTC
AATTTAATCA GATATTATTC TGGCATCTCC AGAAATGAGA TTTCTAAGCT TACAGGTTTA
GATAAAAGTA CGGTGACAAA GATTACATAT GATTTGATTT CTAAAAACTT AATAGAAGAA
GGAGATAGAA AATCTTCTAA AAGGGTTGGA AGGAAACCTA TAAAACTGGA AGCAGCGAAA
GGCGTTGCTG CTTCCATTAT CGTTAAGGTT GGAGTTGAAA AAACAGTCGT AGGTCTTGGA
TATATGAATA ATTCAATAAA TAAGATTGTT GAATTTGAAA CCCCAAAAAA TTTTAATGTT
TTTATTGGTA AATTAGCTGT TGAGATAAAA AGAATATATG AAAATGCTAA TGGGAATAAT
ATAGTAGGCC TTTCTTTTTC TTTTCCAGGA ATGATCGATA GGAAAAACTT GATTATCGAA
TACGTACCTC ATTTTAATTG GAGTGAGATC GATCTTAAAG CAGCTCTTTT AAAGGAACTA
CCCAAATGTG ACAAACCAAT TTTCGCTGCA AATGAGGCAA AGTTAGCTCT ACAAGCAGAG
ATGTATTTTA ACAAGAATAT TGCCAACCTA AACAACGGAG TCTATGTTTT CATATCTCAG
GGGATAGGAG GAGCTTTGCT TATAGACGGT CAAATTCATT TAGGGCCTAA TTACACAGCA
GGTGAGTTTG GTCACATGAG TATCGATGAA GATGGGAGAA AATGTTTTTG TAATAATCAA
GGATGTTGGG AGACGTTTGC TTCAATTGAT ACCGTTTCTA AGATATACGA ATACAGCAAT
GGGCGATTGG AAGGCAACAA TTACGAAGAA AAATTCAGAA ATCTTCTTTT AAAAGCAGAG
AAGAAGGAAG GAAACGCCAA TGAAATAATT AAACAGATGT TGTATTATTT GGGAGTAGGA
ACGGTTAATT TAATAAATAT CTTAAATCCT GAGTTTGTAA TTTTTGGGGG GTATGGGTAT
CTTTTTCCGG ATGAGTATTT CACAGAGATT GAAAATATTA TAAGGACGCG GGCTCTGAAA
CCAGCATTAA AATCTTTCAA AAAGCCTATG AGGCCTGTTT TTGATATAGA TACAGCATGT
CTAACAGGAG CAAATTTAAG GGTAATGGAT GATTTTGCAG AAAAAGCGGT AATTTAG
|
|---|
| Protein sequence | MKIKKINAER MGYSNKLMVF NLIRYYSGIS RNEISKLTGL DKSTVTKITY DLISKNLIEE
GDRKSSKRVG RKPIKLEAAK GVAASIIVKV GVEKTVVGLG YMNNSINKIV EFETPKNFNV
FIGKLAVEIK RIYENANGNN IVGLSFSFPG MIDRKNLIIE YVPHFNWSEI DLKAALLKEL
PKCDKPIFAA NEAKLALQAE MYFNKNIANL NNGVYVFISQ GIGGALLIDG QIHLGPNYTA
GEFGHMSIDE DGRKCFCNNQ GCWETFASID TVSKIYEYSN GRLEGNNYEE KFRNLLLKAE
KKEGNANEII KQMLYYLGVG TVNLINILNP EFVIFGGYGY LFPDEYFTEI ENIIRTRALK
PALKSFKKPM RPVFDIDTAC LTGANLRVMD DFAEKAVI
|
|---|
| |