| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0218 |
|---|
| Symbol | |
|---|
| ID | 5757116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 220768 |
|---|
| End bp | 221592 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641301418 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_001567287 |
|---|
| Protein GI | 160901706 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAA AACTGTGTGT AATAGGATTG GGAAAAATGG GGAGCACGTT AGTAAAAGGT
CTAATCCAAA CAAAAACACT TAAAAGAGAA CAAATAATCG GAACAGATCT CTTTGAATAC
GATTCTGAAA AAAATTCTAA TTACTCCGAC ATAAAAACTA TCTCGGATAA CGCAAAAGCG
GTGAAAGAAT CCGACATCGT TCTTTTAGCT GTGAAACCAC AAGTAATAGA CAAAGTATTG
GAAGAAATAA GTTCTTCTTG TGAAAACAAG ATAGTTATAT CAATAGCTGC AGGAGTAAGT
CTGCGCCATT TGGATAAAGC TTTACCAACT TCATCAAAGA TAATAAGAGC TATGCCCAAC
ACCCCTATTT TAGTAGGTGA AGGTGTTATT GCTATTAGCA AAAAGAAGAA CGTTGACGAA
AATGACTTGA AAAGGGTTAA GGAGATTTTG GAAAGCGTTG GAAAGGTATA TTTGGTTGAA
GAGGATATAA TGGATGCGAT AACGGCTTTA AGCGGGAGCG GACCAGCATA TGTCTATATG
ATGATAGAGG CTTTATCCGA CGGCGGTGTC CTGATGGGTT TACCTAGAGA GCTTTCCACT
GAATTTGCCG CAAGAACATT ACTTGGCGCT GCAAGGATGG TTTTAGAAAC GGGAAAACAT
CCTGGAGAGT TGAAAGATAT GGTTACTTCC CCAGGAGGCA CAGCAATTAA AGGAATAGAA
GTTTTAGAAT CTCATGGTTT ACGAGGTATC CTTATGGACG CAGTAAAAGA AGCAACTATA
AGGTCAAAAG AACTTAATTC ACAAAGGGGT GTGGATGTTG ATTGA
|
|---|
| Protein sequence | MNEKLCVIGL GKMGSTLVKG LIQTKTLKRE QIIGTDLFEY DSEKNSNYSD IKTISDNAKA
VKESDIVLLA VKPQVIDKVL EEISSSCENK IVISIAAGVS LRHLDKALPT SSKIIRAMPN
TPILVGEGVI AISKKKNVDE NDLKRVKEIL ESVGKVYLVE EDIMDAITAL SGSGPAYVYM
MIEALSDGGV LMGLPRELST EFAARTLLGA ARMVLETGKH PGELKDMVTS PGGTAIKGIE
VLESHGLRGI LMDAVKEATI RSKELNSQRG VDVD
|
|---|
| |