| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0199 |
|---|
| Symbol | |
|---|
| ID | 5758509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 201693 |
|---|
| End bp | 203060 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641301399 |
|---|
| Product | cell wall hydrolase/autolysin |
|---|
| Protein accession | YP_001567268 |
|---|
| Protein GI | 160901687 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.140205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAG GGATAATTAG GCGGTTAATA ATTTTTGGTT TTTTATTTCT CTCGGTTATT
ACGTTTCCAA AAGCACTTTA TTTTCAATGG AGAGAAATAG ATTCGGCTTA CTATTTCGAA
GATGGGGAGA ATCTATATGT TAGTTTAAAG GTTATTTCTG AAAAAAGTGG AAGAACCTTA
GATGTATATA ATGATACGTT GATTTACGTA AAAGATAGTA AATGGAACGT TTTCATTTTT
CCTCAGAATA GTTTAGCCAT TATCAACAGC ACTGAATCCC TTCATTTCGA TCCAAATGAT
CTGAAAATAA TTGATGGAGA AATTTATTTA ACCGCAGAAT TAATGGCTAA GTTGATCAAT
CTAGAATTAA TTTCTAACGA TTCCGCTGTA TACTTGAATC TGCCACTAAC TCAATTAACT
TCAATAAAAA CGATCATACA AAAAACTGAT GCTAGAATAA TAATAGAGCT TTCTTCGAGT
CCTGACGATG TTGGAATATA TCCTTTGGTT AATAAATCTG GATATTTGAT TAAGATTAAA
GGTGCCGAAA TCCCCAATTC TTATTACTAT GAAGAATACA ACAATAAGAT TAATTACATA
AAGGCGTATC ACTATTCGCC AACAGAAGTA TGGATACAAG TAAAACTGAA CAACTCTGCG
GATATAGAAG AATTAATTGA AGAAAGTAGG ATAATATTAG ATCTTTCTTT TAAAGATAAA
ATCACTTTGC CAGTTTTAGT TTTGGATCCA GGTCATGGAG GGATAGATCC AGGAGCGGTT
GGTCCAAACA AAACTTTTGA AAAAGATATA ACTTTAAAGG TAGCAAAAAG AGCTCAAGAA
CTATTGAAAC CTTACAGTGT TGACGTTTAT CTAACTAGGA CAAGCGATGT ATACGTTGAT
TTACACGATA GAGCGGTTTT TTCTAATGAA AAAGTTGCGG ATTTATTCGT TAGTTTACAC
TTGAATGATT ATCCTCAAGA TACAACAGTT TATGGATCGG AGGTTTACTA TTTTGATTTT
TCAGAAAGCG CATATGCGAG AAGAATAGCC TATCGGGAAA ATTTGGATTT TAATACTGAT
AAGACTCTCA TAGAAACATG GGTAACGGAT AAAGAAAACA GTCTAGATGA AAGCGAGAAG
TTTGCTAATA TATTGGGAAA TTATTTGAAT GTAAATGGAG TTAAACTTAG GGGAGTTTAT
ACTGCGGAGT TTGCTGTTTT GGCTTATACT AGAAGCCCCG CTGTTTTATT TGAAATGGAA
TTTATCAGTA ACCCTAAAGT AGTAGATGAG TTTACGAGTG GAAAATATGT GGATGTTTTT
GCTGAAATTA TTAAAAATGC AGTTATTGAT TTTTTTGGTC TAAAATAG
|
|---|
| Protein sequence | MNKGIIRRLI IFGFLFLSVI TFPKALYFQW REIDSAYYFE DGENLYVSLK VISEKSGRTL
DVYNDTLIYV KDSKWNVFIF PQNSLAIINS TESLHFDPND LKIIDGEIYL TAELMAKLIN
LELISNDSAV YLNLPLTQLT SIKTIIQKTD ARIIIELSSS PDDVGIYPLV NKSGYLIKIK
GAEIPNSYYY EEYNNKINYI KAYHYSPTEV WIQVKLNNSA DIEELIEESR IILDLSFKDK
ITLPVLVLDP GHGGIDPGAV GPNKTFEKDI TLKVAKRAQE LLKPYSVDVY LTRTSDVYVD
LHDRAVFSNE KVADLFVSLH LNDYPQDTTV YGSEVYYFDF SESAYARRIA YRENLDFNTD
KTLIETWVTD KENSLDESEK FANILGNYLN VNGVKLRGVY TAEFAVLAYT RSPAVLFEME
FISNPKVVDE FTSGKYVDVF AEIIKNAVID FFGLK
|
|---|
| |